Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.31■□□□□ 0.52
SNRNP40Q96DI7 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.31■□□□□ 0.52
SNRNP40Q96DI7 AL121829.2-201ENST00000620908 328 ntBASIC18.31■□□□□ 0.52
SNRNP40Q96DI7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.31■□□□□ 0.52
SNRNP40Q96DI7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNRNP40Q96DI7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRNP40Q96DI7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRNP40Q96DI7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRNP40Q96DI7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.31■□□□□ 0.52
SNRNP40Q96DI7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRNP40Q96DI7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRNP40Q96DI7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRNP40Q96DI7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNRNP40Q96DI7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.3■□□□□ 0.52
SNRNP40Q96DI7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRNP40Q96DI7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRNP40Q96DI7 KRT16P5-201ENST00000455284 522 ntBASIC18.3■□□□□ 0.52
SNRNP40Q96DI7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.3■□□□□ 0.52
SNRNP40Q96DI7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.3■□□□□ 0.52
SNRNP40Q96DI7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRNP40Q96DI7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.3■□□□□ 0.52
SNRNP40Q96DI7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.3■□□□□ 0.52
SNRNP40Q96DI7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRNP40Q96DI7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.3■□□□□ 0.52
SNRNP40Q96DI7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRNP40Q96DI7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRNP40Q96DI7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.29■□□□□ 0.52
SNRNP40Q96DI7 AC012676.1-201ENST00000574705 1949 ntBASIC18.29■□□□□ 0.52
SNRNP40Q96DI7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNRNP40Q96DI7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SNRNP40Q96DI7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNRNP40Q96DI7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNRNP40Q96DI7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.29■□□□□ 0.52
SNRNP40Q96DI7 KRT18P35-201ENST00000510488 1269 ntBASIC18.29■□□□□ 0.52
SNRNP40Q96DI7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.29■□□□□ 0.52
SNRNP40Q96DI7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.29■□□□□ 0.52
SNRNP40Q96DI7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.29■□□□□ 0.52
SNRNP40Q96DI7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.29■□□□□ 0.52
SNRNP40Q96DI7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.29■□□□□ 0.52
SNRNP40Q96DI7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNRNP40Q96DI7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SNRNP40Q96DI7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.29■□□□□ 0.52
SNRNP40Q96DI7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.29■□□□□ 0.52
SNRNP40Q96DI7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.29■□□□□ 0.52
SNRNP40Q96DI7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.29■□□□□ 0.52
SNRNP40Q96DI7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.28■□□□□ 0.52
SNRNP40Q96DI7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SNRNP40Q96DI7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNRNP40Q96DI7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNRNP40Q96DI7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNRNP40Q96DI7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNRNP40Q96DI7 FAM197Y1-201ENST00000421178 764 ntBASIC18.28■□□□□ 0.52
SNRNP40Q96DI7 AL353807.1-201ENST00000427475 662 ntBASIC18.28■□□□□ 0.52
SNRNP40Q96DI7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.28■□□□□ 0.52
SNRNP40Q96DI7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.28■□□□□ 0.52
SNRNP40Q96DI7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SNRNP40Q96DI7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.28■□□□□ 0.52
SNRNP40Q96DI7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNRNP40Q96DI7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.28■□□□□ 0.52
SNRNP40Q96DI7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.28■□□□□ 0.52
SNRNP40Q96DI7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.28■□□□□ 0.52
SNRNP40Q96DI7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNRNP40Q96DI7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNRNP40Q96DI7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.28■□□□□ 0.52
SNRNP40Q96DI7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SNRNP40Q96DI7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNRNP40Q96DI7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
SNRNP40Q96DI7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.27■□□□□ 0.52
SNRNP40Q96DI7 NBPF21P-201ENST00000425093 1451 ntBASIC18.27■□□□□ 0.52
SNRNP40Q96DI7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.27■□□□□ 0.52
SNRNP40Q96DI7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNRNP40Q96DI7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNRNP40Q96DI7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNRNP40Q96DI7 ARMC10P1-201ENST00000313754 855 ntBASIC18.27■□□□□ 0.52
SNRNP40Q96DI7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SNRNP40Q96DI7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNRNP40Q96DI7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.27■□□□□ 0.52
SNRNP40Q96DI7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SNRNP40Q96DI7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.27■□□□□ 0.52
SNRNP40Q96DI7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SNRNP40Q96DI7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNRNP40Q96DI7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNRNP40Q96DI7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNRNP40Q96DI7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNRNP40Q96DI7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
SNRNP40Q96DI7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SNRNP40Q96DI7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
SNRNP40Q96DI7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.26■□□□□ 0.51
SNRNP40Q96DI7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNRNP40Q96DI7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNRNP40Q96DI7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNRNP40Q96DI7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNRNP40Q96DI7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNRNP40Q96DI7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNRNP40Q96DI7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
SNRNP40Q96DI7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SNRNP40Q96DI7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNRNP40Q96DI7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNRNP40Q96DI7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNRNP40Q96DI7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms