Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC25.08■■□□□ 1.61
RTL9Q8NET4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC25.08■■□□□ 1.61
RTL9Q8NET4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RTL9Q8NET4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RTL9Q8NET4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RTL9Q8NET4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RTL9Q8NET4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.08■■□□□ 1.61
RTL9Q8NET4 AC121338.2-201ENST00000622535 1744 ntBASIC25.08■■□□□ 1.61
RTL9Q8NET4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
RTL9Q8NET4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RTL9Q8NET4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RTL9Q8NET4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RTL9Q8NET4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
RTL9Q8NET4 AC211429.1-201ENST00000415277 523 ntBASIC25.07■■□□□ 1.6
RTL9Q8NET4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RTL9Q8NET4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RTL9Q8NET4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RTL9Q8NET4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
RTL9Q8NET4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RTL9Q8NET4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RTL9Q8NET4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RTL9Q8NET4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
RTL9Q8NET4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
RTL9Q8NET4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
RTL9Q8NET4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RTL9Q8NET4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC25.06■■□□□ 1.6
RTL9Q8NET4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC25.06■■□□□ 1.6
RTL9Q8NET4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC25.06■■□□□ 1.6
RTL9Q8NET4 AC233702.5-201ENST00000584107 538 ntBASIC25.06■■□□□ 1.6
RTL9Q8NET4 AL023875.1-201ENST00000640777 796 ntBASIC25.06■■□□□ 1.6
RTL9Q8NET4 FEM1AP4-201ENST00000443167 1987 ntBASIC25.06■■□□□ 1.6
RTL9Q8NET4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RTL9Q8NET4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
RTL9Q8NET4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RTL9Q8NET4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
RTL9Q8NET4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RTL9Q8NET4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC25.05■■□□□ 1.6
RTL9Q8NET4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTL9Q8NET4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC25.05■■□□□ 1.6
RTL9Q8NET4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
RTL9Q8NET4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
RTL9Q8NET4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTL9Q8NET4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC25.05■■□□□ 1.6
RTL9Q8NET4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTL9Q8NET4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC25.05■■□□□ 1.6
RTL9Q8NET4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTL9Q8NET4 PTBP1P-201ENST00000554374 1601 ntBASIC25.05■■□□□ 1.6
RTL9Q8NET4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
RTL9Q8NET4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTL9Q8NET4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTL9Q8NET4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTL9Q8NET4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RTL9Q8NET4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTL9Q8NET4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTL9Q8NET4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTL9Q8NET4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTL9Q8NET4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC25.05■■□□□ 1.6
RTL9Q8NET4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC25.05■■□□□ 1.6
RTL9Q8NET4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RTL9Q8NET4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RTL9Q8NET4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RTL9Q8NET4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC25.04■■□□□ 1.6
RTL9Q8NET4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RTL9Q8NET4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
RTL9Q8NET4 MAX-217ENST00000557277 728 ntTSL 3 BASIC25.04■■□□□ 1.6
RTL9Q8NET4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC25.04■■□□□ 1.6
RTL9Q8NET4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RTL9Q8NET4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC25.03■■□□□ 1.6
RTL9Q8NET4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC25.03■■□□□ 1.6
RTL9Q8NET4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
RTL9Q8NET4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RTL9Q8NET4 AC079834.2-201ENST00000609776 1949 ntBASIC25.03■■□□□ 1.6
RTL9Q8NET4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RTL9Q8NET4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RTL9Q8NET4 KRASP1-201ENST00000407852 552 ntBASIC25.03■■□□□ 1.6
RTL9Q8NET4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC25.03■■□□□ 1.6
RTL9Q8NET4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC25.03■■□□□ 1.6
RTL9Q8NET4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC25.03■■□□□ 1.6
RTL9Q8NET4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC25.03■■□□□ 1.6
RTL9Q8NET4 AC110285.5-201ENST00000611501 352 ntBASIC25.03■■□□□ 1.6
RTL9Q8NET4 AL121829.2-201ENST00000620908 328 ntBASIC25.03■■□□□ 1.6
RTL9Q8NET4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RTL9Q8NET4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RTL9Q8NET4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
RTL9Q8NET4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RTL9Q8NET4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RTL9Q8NET4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
RTL9Q8NET4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
RTL9Q8NET4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
RTL9Q8NET4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
RTL9Q8NET4 FAM210CP-201ENST00000445714 574 ntBASIC25.02■■□□□ 1.6
RTL9Q8NET4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC25.02■■□□□ 1.6
RTL9Q8NET4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC25.02■■□□□ 1.6
RTL9Q8NET4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC25.02■■□□□ 1.6
RTL9Q8NET4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC25.02■■□□□ 1.6
RTL9Q8NET4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC25.01■■□□□ 1.59
RTL9Q8NET4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
RTL9Q8NET4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
RTL9Q8NET4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC25.01■■□□□ 1.59
RTL9Q8NET4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms