Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SYNPOQ8N3V7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNPOQ8N3V7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.68■□□□□ 0.9
SYNPOQ8N3V7 AC087499.1-201ENST00000418141 1075 ntBASIC20.68■□□□□ 0.9
SYNPOQ8N3V7 KRT18P21-201ENST00000515767 1272 ntBASIC20.68■□□□□ 0.9
SYNPOQ8N3V7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.68■□□□□ 0.9
SYNPOQ8N3V7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.68■□□□□ 0.9
SYNPOQ8N3V7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.68■□□□□ 0.9
SYNPOQ8N3V7 AC133561.5-201ENST00000635547 218 ntBASIC20.68■□□□□ 0.9
SYNPOQ8N3V7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNPOQ8N3V7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.68■□□□□ 0.9
SYNPOQ8N3V7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.68■□□□□ 0.9
SYNPOQ8N3V7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNPOQ8N3V7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYNPOQ8N3V7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYNPOQ8N3V7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYNPOQ8N3V7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.67■□□□□ 0.9
SYNPOQ8N3V7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SYNPOQ8N3V7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SYNPOQ8N3V7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYNPOQ8N3V7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.67■□□□□ 0.9
SYNPOQ8N3V7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYNPOQ8N3V7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
SYNPOQ8N3V7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNPOQ8N3V7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNPOQ8N3V7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SYNPOQ8N3V7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNPOQ8N3V7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SYNPOQ8N3V7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SYNPOQ8N3V7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.66■□□□□ 0.9
SYNPOQ8N3V7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.66■□□□□ 0.9
SYNPOQ8N3V7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNPOQ8N3V7 AC012306.2-201ENST00000609350 630 ntBASIC20.66■□□□□ 0.9
SYNPOQ8N3V7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SYNPOQ8N3V7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNPOQ8N3V7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.66■□□□□ 0.9
SYNPOQ8N3V7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.66■□□□□ 0.9
SYNPOQ8N3V7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNPOQ8N3V7 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.66■□□□□ 0.9
SYNPOQ8N3V7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
SYNPOQ8N3V7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SYNPOQ8N3V7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.65■□□□□ 0.9
SYNPOQ8N3V7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYNPOQ8N3V7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SYNPOQ8N3V7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SYNPOQ8N3V7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SYNPOQ8N3V7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYNPOQ8N3V7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.65■□□□□ 0.9
SYNPOQ8N3V7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SYNPOQ8N3V7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.65■□□□□ 0.9
SYNPOQ8N3V7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SYNPOQ8N3V7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SYNPOQ8N3V7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.65■□□□□ 0.9
SYNPOQ8N3V7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.65■□□□□ 0.9
SYNPOQ8N3V7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYNPOQ8N3V7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYNPOQ8N3V7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYNPOQ8N3V7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SYNPOQ8N3V7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SYNPOQ8N3V7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNPOQ8N3V7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNPOQ8N3V7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNPOQ8N3V7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.64■□□□□ 0.89
SYNPOQ8N3V7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SYNPOQ8N3V7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNPOQ8N3V7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNPOQ8N3V7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SYNPOQ8N3V7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.64■□□□□ 0.89
SYNPOQ8N3V7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.64■□□□□ 0.89
SYNPOQ8N3V7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.64■□□□□ 0.89
SYNPOQ8N3V7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.64■□□□□ 0.89
SYNPOQ8N3V7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.64■□□□□ 0.89
SYNPOQ8N3V7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.64■□□□□ 0.89
SYNPOQ8N3V7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.64■□□□□ 0.89
SYNPOQ8N3V7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SYNPOQ8N3V7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SYNPOQ8N3V7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNPOQ8N3V7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNPOQ8N3V7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNPOQ8N3V7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SYNPOQ8N3V7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYNPOQ8N3V7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYNPOQ8N3V7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SYNPOQ8N3V7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SYNPOQ8N3V7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.63■□□□□ 0.89
SYNPOQ8N3V7 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.63■□□□□ 0.89
SYNPOQ8N3V7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SYNPOQ8N3V7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SYNPOQ8N3V7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYNPOQ8N3V7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.63■□□□□ 0.89
SYNPOQ8N3V7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SYNPOQ8N3V7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYNPOQ8N3V7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNPOQ8N3V7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNPOQ8N3V7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNPOQ8N3V7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNPOQ8N3V7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SYNPOQ8N3V7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.62■□□□□ 0.89
SYNPOQ8N3V7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.62■□□□□ 0.89
SYNPOQ8N3V7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms