Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CROCCP3Q8IVE0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CROCCP3Q8IVE0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CROCCP3Q8IVE0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.35■□□□□ 0.53
CROCCP3Q8IVE0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CROCCP3Q8IVE0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.35■□□□□ 0.53
CROCCP3Q8IVE0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CROCCP3Q8IVE0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CROCCP3Q8IVE0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.35■□□□□ 0.53
CROCCP3Q8IVE0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CROCCP3Q8IVE0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CROCCP3Q8IVE0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CROCCP3Q8IVE0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CROCCP3Q8IVE0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CROCCP3Q8IVE0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CROCCP3Q8IVE0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CROCCP3Q8IVE0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CROCCP3Q8IVE0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CROCCP3Q8IVE0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.34■□□□□ 0.53
CROCCP3Q8IVE0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.34■□□□□ 0.53
CROCCP3Q8IVE0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CROCCP3Q8IVE0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CROCCP3Q8IVE0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CROCCP3Q8IVE0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CROCCP3Q8IVE0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CROCCP3Q8IVE0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CROCCP3Q8IVE0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CROCCP3Q8IVE0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CROCCP3Q8IVE0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.33■□□□□ 0.53
CROCCP3Q8IVE0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CROCCP3Q8IVE0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CROCCP3Q8IVE0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CROCCP3Q8IVE0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CROCCP3Q8IVE0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CROCCP3Q8IVE0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.33■□□□□ 0.52
CROCCP3Q8IVE0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CROCCP3Q8IVE0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CROCCP3Q8IVE0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CROCCP3Q8IVE0 AL390961.4-201ENST00000623958 2535 ntBASIC18.33■□□□□ 0.52
CROCCP3Q8IVE0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.33■□□□□ 0.52
CROCCP3Q8IVE0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CROCCP3Q8IVE0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CROCCP3Q8IVE0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.33■□□□□ 0.52
CROCCP3Q8IVE0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CROCCP3Q8IVE0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CROCCP3Q8IVE0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CROCCP3Q8IVE0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CROCCP3Q8IVE0 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.33■□□□□ 0.52
CROCCP3Q8IVE0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CROCCP3Q8IVE0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CROCCP3Q8IVE0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CROCCP3Q8IVE0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CROCCP3Q8IVE0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CROCCP3Q8IVE0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CROCCP3Q8IVE0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CROCCP3Q8IVE0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CROCCP3Q8IVE0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CROCCP3Q8IVE0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.32■□□□□ 0.52
CROCCP3Q8IVE0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CROCCP3Q8IVE0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CROCCP3Q8IVE0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.32■□□□□ 0.52
CROCCP3Q8IVE0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CROCCP3Q8IVE0 AC010980.1-201ENST00000587192 1142 ntBASIC18.32■□□□□ 0.52
CROCCP3Q8IVE0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CROCCP3Q8IVE0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CROCCP3Q8IVE0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CROCCP3Q8IVE0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CROCCP3Q8IVE0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CROCCP3Q8IVE0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CROCCP3Q8IVE0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.32■□□□□ 0.52
CROCCP3Q8IVE0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CROCCP3Q8IVE0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.32■□□□□ 0.52
CROCCP3Q8IVE0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CROCCP3Q8IVE0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.31■□□□□ 0.52
CROCCP3Q8IVE0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CROCCP3Q8IVE0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CROCCP3Q8IVE0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CROCCP3Q8IVE0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CROCCP3Q8IVE0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
CROCCP3Q8IVE0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.31■□□□□ 0.52
CROCCP3Q8IVE0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.31■□□□□ 0.52
CROCCP3Q8IVE0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CROCCP3Q8IVE0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.31■□□□□ 0.52
CROCCP3Q8IVE0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CROCCP3Q8IVE0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.31■□□□□ 0.52
CROCCP3Q8IVE0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.31■□□□□ 0.52
CROCCP3Q8IVE0 AC020763.4-201ENST00000623414 4170 ntBASIC18.31■□□□□ 0.52
CROCCP3Q8IVE0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.31■□□□□ 0.52
CROCCP3Q8IVE0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CROCCP3Q8IVE0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.31■□□□□ 0.52
CROCCP3Q8IVE0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CROCCP3Q8IVE0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CROCCP3Q8IVE0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.31■□□□□ 0.52
CROCCP3Q8IVE0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CROCCP3Q8IVE0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms