Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSMD2Q7Z408 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSMD2Q7Z408 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSMD2Q7Z408 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSMD2Q7Z408 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CSMD2Q7Z408 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.24■□□□□ 0.35
CSMD2Q7Z408 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.24■□□□□ 0.35
CSMD2Q7Z408 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.23■□□□□ 0.35
CSMD2Q7Z408 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD2Q7Z408 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.23■□□□□ 0.35
CSMD2Q7Z408 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.23■□□□□ 0.35
CSMD2Q7Z408 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD2Q7Z408 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD2Q7Z408 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD2Q7Z408 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD2Q7Z408 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD2Q7Z408 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.23■□□□□ 0.35
CSMD2Q7Z408 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CSMD2Q7Z408 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD2Q7Z408 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD2Q7Z408 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD2Q7Z408 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD2Q7Z408 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.23■□□□□ 0.35
CSMD2Q7Z408 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.23■□□□□ 0.35
CSMD2Q7Z408 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD2Q7Z408 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.23■□□□□ 0.35
CSMD2Q7Z408 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.23■□□□□ 0.35
CSMD2Q7Z408 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD2Q7Z408 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CSMD2Q7Z408 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD2Q7Z408 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSMD2Q7Z408 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CSMD2Q7Z408 AC245052.3-201ENST00000450182 901 ntBASIC17.22■□□□□ 0.35
CSMD2Q7Z408 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.22■□□□□ 0.35
CSMD2Q7Z408 AC073195.1-201ENST00000607241 877 ntBASIC17.22■□□□□ 0.35
CSMD2Q7Z408 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.22■□□□□ 0.35
CSMD2Q7Z408 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.22■□□□□ 0.35
CSMD2Q7Z408 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSMD2Q7Z408 FAM8A6P-201ENST00000407496 1135 ntBASIC17.22■□□□□ 0.35
CSMD2Q7Z408 AC063952.2-201ENST00000498792 1227 ntBASIC17.22■□□□□ 0.35
CSMD2Q7Z408 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSMD2Q7Z408 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
CSMD2Q7Z408 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSMD2Q7Z408 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.22■□□□□ 0.35
CSMD2Q7Z408 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.22■□□□□ 0.35
CSMD2Q7Z408 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.22■□□□□ 0.35
CSMD2Q7Z408 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSMD2Q7Z408 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSMD2Q7Z408 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CSMD2Q7Z408 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSMD2Q7Z408 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.21■□□□□ 0.35
CSMD2Q7Z408 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSMD2Q7Z408 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.21■□□□□ 0.35
CSMD2Q7Z408 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSMD2Q7Z408 AC116562.2-201ENST00000507042 360 ntBASIC17.21■□□□□ 0.35
CSMD2Q7Z408 AP000550.4-202ENST00000639755 178 ntBASIC17.21■□□□□ 0.35
CSMD2Q7Z408 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSMD2Q7Z408 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSMD2Q7Z408 NBPF21P-201ENST00000425093 1451 ntBASIC17.21■□□□□ 0.35
CSMD2Q7Z408 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CSMD2Q7Z408 AC080038.3-201ENST00000623346 1952 ntBASIC17.21■□□□□ 0.35
CSMD2Q7Z408 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSMD2Q7Z408 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CSMD2Q7Z408 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.21■□□□□ 0.35
CSMD2Q7Z408 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.21■□□□□ 0.35
CSMD2Q7Z408 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CSMD2Q7Z408 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CSMD2Q7Z408 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CSMD2Q7Z408 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.2■□□□□ 0.34
CSMD2Q7Z408 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSMD2Q7Z408 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.2■□□□□ 0.34
CSMD2Q7Z408 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.2■□□□□ 0.34
CSMD2Q7Z408 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSMD2Q7Z408 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSMD2Q7Z408 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSMD2Q7Z408 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSMD2Q7Z408 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.2■□□□□ 0.34
CSMD2Q7Z408 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.2■□□□□ 0.34
CSMD2Q7Z408 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSMD2Q7Z408 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSMD2Q7Z408 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSMD2Q7Z408 NAPSB-206ENST00000562112 1266 ntBASIC17.2■□□□□ 0.34
CSMD2Q7Z408 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CSMD2Q7Z408 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSMD2Q7Z408 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSMD2Q7Z408 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSMD2Q7Z408 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.2■□□□□ 0.34
CSMD2Q7Z408 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSMD2Q7Z408 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSMD2Q7Z408 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.2■□□□□ 0.34
CSMD2Q7Z408 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSMD2Q7Z408 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.19■□□□□ 0.34
CSMD2Q7Z408 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSMD2Q7Z408 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSMD2Q7Z408 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CSMD2Q7Z408 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSMD2Q7Z408 AK4P3-201ENST00000418260 669 ntBASIC17.19■□□□□ 0.34
CSMD2Q7Z408 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CSMD2Q7Z408 ATP5G1P1-201ENST00000448724 379 ntBASIC17.19■□□□□ 0.34
CSMD2Q7Z408 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms