Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 AC112907.3-201ENST00000577781 2400 ntBASIC22.12■■□□□ 1.13
FOXR2Q6PJQ5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
FOXR2Q6PJQ5 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
FOXR2Q6PJQ5 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
FOXR2Q6PJQ5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
FOXR2Q6PJQ5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
FOXR2Q6PJQ5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
FOXR2Q6PJQ5 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
FOXR2Q6PJQ5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.12■■□□□ 1.13
FOXR2Q6PJQ5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
FOXR2Q6PJQ5 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.12■■□□□ 1.13
FOXR2Q6PJQ5 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
FOXR2Q6PJQ5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
FOXR2Q6PJQ5 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
FOXR2Q6PJQ5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
FOXR2Q6PJQ5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC22.11■■□□□ 1.13
FOXR2Q6PJQ5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
FOXR2Q6PJQ5 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
FOXR2Q6PJQ5 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
FOXR2Q6PJQ5 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.11■■□□□ 1.13
FOXR2Q6PJQ5 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.11■■□□□ 1.13
FOXR2Q6PJQ5 BID-214ENST00000617586 542 ntTSL 5 BASIC22.11■■□□□ 1.13
FOXR2Q6PJQ5 AC105020.6-201ENST00000621523 1217 ntBASIC22.11■■□□□ 1.13
FOXR2Q6PJQ5 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
FOXR2Q6PJQ5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
FOXR2Q6PJQ5 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
FOXR2Q6PJQ5 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
FOXR2Q6PJQ5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
FOXR2Q6PJQ5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.1■■□□□ 1.13
FOXR2Q6PJQ5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
FOXR2Q6PJQ5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
FOXR2Q6PJQ5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
FOXR2Q6PJQ5 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.1■■□□□ 1.13
FOXR2Q6PJQ5 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.1■■□□□ 1.13
FOXR2Q6PJQ5 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.1■■□□□ 1.13
FOXR2Q6PJQ5 AL162430.1-201ENST00000480705 870 ntBASIC22.1■■□□□ 1.13
FOXR2Q6PJQ5 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.1■■□□□ 1.13
FOXR2Q6PJQ5 MIR5787-201ENST00000611784 55 ntBASIC22.1■■□□□ 1.13
FOXR2Q6PJQ5 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.1■■□□□ 1.13
FOXR2Q6PJQ5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
FOXR2Q6PJQ5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
FOXR2Q6PJQ5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
FOXR2Q6PJQ5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.09■■□□□ 1.13
FOXR2Q6PJQ5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
FOXR2Q6PJQ5 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
FOXR2Q6PJQ5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
FOXR2Q6PJQ5 AL391422.3-201ENST00000603791 2761 ntBASIC22.09■■□□□ 1.13
FOXR2Q6PJQ5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
FOXR2Q6PJQ5 KRT18P68-201ENST00000392293 1000 ntBASIC22.09■■□□□ 1.13
FOXR2Q6PJQ5 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.09■■□□□ 1.13
FOXR2Q6PJQ5 CYP2T1P-201ENST00000432607 1285 ntBASIC22.09■■□□□ 1.13
FOXR2Q6PJQ5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.09■■□□□ 1.13
FOXR2Q6PJQ5 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.09■■□□□ 1.13
FOXR2Q6PJQ5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.09■■□□□ 1.13
FOXR2Q6PJQ5 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.09■■□□□ 1.13
FOXR2Q6PJQ5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.09■■□□□ 1.13
FOXR2Q6PJQ5 OR10C1-204ENST00000622521 1039 ntBASIC22.09■■□□□ 1.13
FOXR2Q6PJQ5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
FOXR2Q6PJQ5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.09■■□□□ 1.13
FOXR2Q6PJQ5 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
FOXR2Q6PJQ5 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
FOXR2Q6PJQ5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC22.09■■□□□ 1.13
FOXR2Q6PJQ5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
FOXR2Q6PJQ5 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
FOXR2Q6PJQ5 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
FOXR2Q6PJQ5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
FOXR2Q6PJQ5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
FOXR2Q6PJQ5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
FOXR2Q6PJQ5 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
FOXR2Q6PJQ5 AL512625.2-201ENST00000417533 625 ntBASIC22.08■■□□□ 1.13
FOXR2Q6PJQ5 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
FOXR2Q6PJQ5 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.08■■□□□ 1.13
FOXR2Q6PJQ5 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.08■■□□□ 1.13
FOXR2Q6PJQ5 CYP2T3P-201ENST00000601990 817 ntBASIC22.08■■□□□ 1.13
FOXR2Q6PJQ5 AC069236.1-201ENST00000604339 616 ntBASIC22.08■■□□□ 1.13
FOXR2Q6PJQ5 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.08■■□□□ 1.13
FOXR2Q6PJQ5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
FOXR2Q6PJQ5 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.08■■□□□ 1.12
FOXR2Q6PJQ5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
FOXR2Q6PJQ5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
FOXR2Q6PJQ5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.12
FOXR2Q6PJQ5 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
FOXR2Q6PJQ5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
FOXR2Q6PJQ5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22.07■■□□□ 1.12
FOXR2Q6PJQ5 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
FOXR2Q6PJQ5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC22.07■■□□□ 1.12
FOXR2Q6PJQ5 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC22.07■■□□□ 1.12
FOXR2Q6PJQ5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.07■■□□□ 1.12
FOXR2Q6PJQ5 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
FOXR2Q6PJQ5 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
FOXR2Q6PJQ5 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.07■■□□□ 1.12
FOXR2Q6PJQ5 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.07■■□□□ 1.12
FOXR2Q6PJQ5 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.07■■□□□ 1.12
FOXR2Q6PJQ5 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.07■■□□□ 1.12
FOXR2Q6PJQ5 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.07■■□□□ 1.12
FOXR2Q6PJQ5 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
FOXR2Q6PJQ5 AL691432.2-201ENST00000607222 2038 ntBASIC22.07■■□□□ 1.12
FOXR2Q6PJQ5 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC22.07■■□□□ 1.12
FOXR2Q6PJQ5 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC22.07■■□□□ 1.12
FOXR2Q6PJQ5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms