Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM88Q6PEY1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM88Q6PEY1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM88Q6PEY1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
TMEM88Q6PEY1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM88Q6PEY1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEM88Q6PEY1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM88Q6PEY1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
TMEM88Q6PEY1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEM88Q6PEY1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.31■□□□□ 0.2
TMEM88Q6PEY1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEM88Q6PEY1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM88Q6PEY1 AC131274.2-201ENST00000580697 1507 ntBASIC16.31■□□□□ 0.2
TMEM88Q6PEY1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM88Q6PEY1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM88Q6PEY1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM88Q6PEY1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.31■□□□□ 0.2
TMEM88Q6PEY1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.31■□□□□ 0.2
TMEM88Q6PEY1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM88Q6PEY1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TMEM88Q6PEY1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM88Q6PEY1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM88Q6PEY1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM88Q6PEY1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM88Q6PEY1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
TMEM88Q6PEY1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM88Q6PEY1 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88Q6PEY1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TMEM88Q6PEY1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TMEM88Q6PEY1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM88Q6PEY1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
TMEM88Q6PEY1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88Q6PEY1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88Q6PEY1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88Q6PEY1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TMEM88Q6PEY1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88Q6PEY1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM88Q6PEY1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM88Q6PEY1 MTDHP2-201ENST00000601468 714 ntBASIC16.3■□□□□ 0.2
TMEM88Q6PEY1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM88Q6PEY1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC16.3■□□□□ 0.2
TMEM88Q6PEY1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TMEM88Q6PEY1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88Q6PEY1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM88Q6PEY1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88Q6PEY1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88Q6PEY1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88Q6PEY1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88Q6PEY1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88Q6PEY1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TMEM88Q6PEY1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88Q6PEY1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TMEM88Q6PEY1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88Q6PEY1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM88Q6PEY1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TMEM88Q6PEY1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM88Q6PEY1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88Q6PEY1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88Q6PEY1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TMEM88Q6PEY1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88Q6PEY1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.29■□□□□ 0.2
TMEM88Q6PEY1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88Q6PEY1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM88Q6PEY1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88Q6PEY1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM88Q6PEY1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88Q6PEY1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM88Q6PEY1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88Q6PEY1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM88Q6PEY1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM88Q6PEY1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.29■□□□□ 0.2
TMEM88Q6PEY1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.29■□□□□ 0.2
TMEM88Q6PEY1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88Q6PEY1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88Q6PEY1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88Q6PEY1 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88Q6PEY1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 AC010997.5-201ENST00000609182 354 ntBASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms