Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SYCNQ0VAF6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
SYCNQ0VAF6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SYCNQ0VAF6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SYCNQ0VAF6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SYCNQ0VAF6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SYCNQ0VAF6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SYCNQ0VAF6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC13.38□□□□□ -0.27
SYCNQ0VAF6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SYCNQ0VAF6 AC016769.1-201ENST00000409132 1010 ntBASIC13.38□□□□□ -0.27
SYCNQ0VAF6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SYCNQ0VAF6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SYCNQ0VAF6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SYCNQ0VAF6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SYCNQ0VAF6 KRT18P61-201ENST00000585825 1298 ntBASIC13.38□□□□□ -0.27
SYCNQ0VAF6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
SYCNQ0VAF6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC13.38□□□□□ -0.27
SYCNQ0VAF6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SYCNQ0VAF6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SYCNQ0VAF6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC13.38□□□□□ -0.27
SYCNQ0VAF6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
SYCNQ0VAF6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SYCNQ0VAF6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
SYCNQ0VAF6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SYCNQ0VAF6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SYCNQ0VAF6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SYCNQ0VAF6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 SAPCD2P1-201ENST00000395413 1184 ntBASIC13.37□□□□□ -0.27
SYCNQ0VAF6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 AC010536.3-201ENST00000620306 533 ntBASIC13.37□□□□□ -0.27
SYCNQ0VAF6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SYCNQ0VAF6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 AC073130.3-201ENST00000624389 2278 ntBASIC13.36□□□□□ -0.27
SYCNQ0VAF6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 PGM5P4-201ENST00000421970 445 ntBASIC13.36□□□□□ -0.27
SYCNQ0VAF6 TERF1P5-201ENST00000477545 1207 ntBASIC13.36□□□□□ -0.27
SYCNQ0VAF6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 AL591742.1-201ENST00000604433 565 ntBASIC13.36□□□□□ -0.27
SYCNQ0VAF6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 BCL2-203ENST00000589955 5011 ntBASIC13.36□□□□□ -0.27
SYCNQ0VAF6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SYCNQ0VAF6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms