Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.27■□□□□ 0.68
RAE1P78406 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAE1P78406 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.27■□□□□ 0.68
RAE1P78406 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAE1P78406 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAE1P78406 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAE1P78406 AC022517.1-201ENST00000592429 346 ntBASIC19.27■□□□□ 0.68
RAE1P78406 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAE1P78406 BID-214ENST00000617586 542 ntTSL 5 BASIC19.27■□□□□ 0.68
RAE1P78406 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RAE1P78406 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
RAE1P78406 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
RAE1P78406 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.27■□□□□ 0.67
RAE1P78406 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAE1P78406 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAE1P78406 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RAE1P78406 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAE1P78406 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.26■□□□□ 0.67
RAE1P78406 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAE1P78406 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAE1P78406 PGM5P4-201ENST00000421970 445 ntBASIC19.26■□□□□ 0.67
RAE1P78406 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAE1P78406 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAE1P78406 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RAE1P78406 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.26■□□□□ 0.67
RAE1P78406 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAE1P78406 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.26■□□□□ 0.67
RAE1P78406 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
RAE1P78406 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.26■□□□□ 0.67
RAE1P78406 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAE1P78406 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAE1P78406 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAE1P78406 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RAE1P78406 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAE1P78406 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
RAE1P78406 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAE1P78406 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.25■□□□□ 0.67
RAE1P78406 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAE1P78406 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAE1P78406 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAE1P78406 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAE1P78406 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAE1P78406 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RAE1P78406 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAE1P78406 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.25■□□□□ 0.67
RAE1P78406 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RAE1P78406 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.25■□□□□ 0.67
RAE1P78406 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RAE1P78406 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.25■□□□□ 0.67
RAE1P78406 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAE1P78406 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.25■□□□□ 0.67
RAE1P78406 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RAE1P78406 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAE1P78406 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAE1P78406 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.24■□□□□ 0.67
RAE1P78406 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAE1P78406 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAE1P78406 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAE1P78406 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.24■□□□□ 0.67
RAE1P78406 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAE1P78406 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.24■□□□□ 0.67
RAE1P78406 CYP2T1P-201ENST00000432607 1285 ntBASIC19.24■□□□□ 0.67
RAE1P78406 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.24■□□□□ 0.67
RAE1P78406 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.24■□□□□ 0.67
RAE1P78406 AC100791.3-201ENST00000617619 330 ntBASIC19.24■□□□□ 0.67
RAE1P78406 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.24■□□□□ 0.67
RAE1P78406 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAE1P78406 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.24■□□□□ 0.67
RAE1P78406 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RAE1P78406 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAE1P78406 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RAE1P78406 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAE1P78406 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.23■□□□□ 0.67
RAE1P78406 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAE1P78406 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAE1P78406 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAE1P78406 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAE1P78406 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.23■□□□□ 0.67
RAE1P78406 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAE1P78406 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.23■□□□□ 0.67
RAE1P78406 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.23■□□□□ 0.67
RAE1P78406 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.23■□□□□ 0.67
RAE1P78406 AC092437.1-201ENST00000624794 1048 ntBASIC19.23■□□□□ 0.67
RAE1P78406 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.23■□□□□ 0.67
RAE1P78406 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAE1P78406 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.23■□□□□ 0.67
RAE1P78406 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.23■□□□□ 0.67
RAE1P78406 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RAE1P78406 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAE1P78406 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAE1P78406 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RAE1P78406 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAE1P78406 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAE1P78406 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAE1P78406 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAE1P78406 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.22■□□□□ 0.67
RAE1P78406 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.22■□□□□ 0.67
RAE1P78406 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAE1P78406 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.22■□□□□ 0.67
RAE1P78406 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms