Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 YBR071WYBR071W 636 nt2.04□□□□□ -2.08
SUB1P54000 SPC110YDR356W 2835 nt2.04□□□□□ -2.08
SUB1P54000 BIG1YHR101C 1008 nt2.03□□□□□ -2.08
SUB1P54000 YBL012CYBL012C 402 nt2.03□□□□□ -2.08
SUB1P54000 NOP15YNL110C 663 nt2.03□□□□□ -2.08
SUB1P54000 TMA22YJR014W 597 nt2.02□□□□□ -2.09
SUB1P54000 SYM1YLR251W 594 nt2.02□□□□□ -2.09
SUB1P54000 VPS15YBR097W 4365 nt2.02□□□□□ -2.09
SUB1P54000 POL5YEL055C 3069 nt2.02□□□□□ -2.09
SUB1P54000 SSQ1YLR369W 1974 nt2.01□□□□□ -2.09
SUB1P54000 GNT1YOR320C 1476 nt2.01□□□□□ -2.09
SUB1P54000 YPR099CYPR099C 357 nt2.01□□□□□ -2.09
SUB1P54000 UTP21YLR409C 2820 nt2□□□□□ -2.09
SUB1P54000 BST1YFL025C 3090 nt2□□□□□ -2.09
SUB1P54000 ATP17YDR377W 306 nt2□□□□□ -2.09
SUB1P54000 YNL114CYNL114C 372 nt2□□□□□ -2.09
SUB1P54000 YBR076C-AYBR076C-A 267 nt2□□□□□ -2.09
SUB1P54000 HMLALPHA2YCL067C 633 nt1.99□□□□□ -2.09
SUB1P54000 MATALPHA2YCR039C 633 nt1.99□□□□□ -2.09
SUB1P54000 APQ13YJL075C 417 nt1.99□□□□□ -2.09
SUB1P54000 HHT1YBR010W 411 nt1.99□□□□□ -2.09
SUB1P54000 snR13snR13 124 nt1.99□□□□□ -2.09
SUB1P54000 DOT6YER088C 2013 nt1.99□□□□□ -2.09
SUB1P54000 OSH6YKR003W 1347 nt1.98□□□□□ -2.09
SUB1P54000 MXR1YER042W 555 nt1.98□□□□□ -2.09
SUB1P54000 VTC1YER072W 390 nt1.98□□□□□ -2.09
SUB1P54000 YHR028W-AYHR028W-A 321 nt1.98□□□□□ -2.09
SUB1P54000 RPL42BYHR141C 321 nt1.98□□□□□ -2.09
SUB1P54000 RPL42AYNL162W 321 nt1.98□□□□□ -2.09
SUB1P54000 FRK1YPL141C 2598 nt1.98□□□□□ -2.09
SUB1P54000 NUP170YBL079W 4509 nt1.98□□□□□ -2.09
SUB1P54000 snR70snR70 164 nt1.97□□□□□ -2.09
SUB1P54000 HUR1YGL168W 333 nt1.97□□□□□ -2.09
SUB1P54000 EGD1YPL037C 474 nt1.97□□□□□ -2.09
SUB1P54000 YBR121C-AYBR121C-A 159 nt1.97□□□□□ -2.09
SUB1P54000 ALK1YGL021W 2283 nt1.96□□□□□ -2.1
SUB1P54000 YER172C-AYER172C-A 381 nt1.96□□□□□ -2.1
SUB1P54000 YGL063C-AYGL063C-A 150 nt1.96□□□□□ -2.1
SUB1P54000 YGR025WYGR025W 303 nt1.96□□□□□ -2.1
SUB1P54000 PAU18YLL064C 363 nt1.96□□□□□ -2.1
SUB1P54000 GPI15YNL038W 690 nt1.96□□□□□ -2.1
SUB1P54000 PAU6YNR076W 363 nt1.96□□□□□ -2.1
SUB1P54000 MAK10YEL053C 2202 nt1.96□□□□□ -2.1
SUB1P54000 ATG11YPR049C 3537 nt1.95□□□□□ -2.1
SUB1P54000 PAN3YKL025C 2040 nt1.95□□□□□ -2.1
SUB1P54000 EMC5YIL027C 426 nt1.95□□□□□ -2.1
SUB1P54000 YJL022WYJL022W 309 nt1.95□□□□□ -2.1
SUB1P54000 VPS55YJR044C 423 nt1.95□□□□□ -2.1
SUB1P54000 PBI2YNL015W 228 nt1.95□□□□□ -2.1
SUB1P54000 SFB2YNL049C 2631 nt1.95□□□□□ -2.1
SUB1P54000 SXM1YDR395W 2835 nt1.95□□□□□ -2.1
SUB1P54000 NCA2YPR155C 1851 nt1.94□□□□□ -2.1
SUB1P54000 HDA3YPR179C 1968 nt1.94□□□□□ -2.1
SUB1P54000 ZRG17YNR039C 1818 nt1.94□□□□□ -2.1
SUB1P54000 YBR032WYBR032W 303 nt1.94□□□□□ -2.1
SUB1P54000 RTP1YMR185W 2946 nt1.94□□□□□ -2.1
SUB1P54000 JIP5YPR169W 1479 nt1.94□□□□□ -2.1
SUB1P54000 YDR008CYDR008C 351 nt1.93□□□□□ -2.1
SUB1P54000 tC(GCA)BtC(GCA)B 72 nt1.93□□□□□ -2.1
SUB1P54000 tC(GCA)GtC(GCA)G 72 nt1.93□□□□□ -2.1
SUB1P54000 tC(GCA)P1tC(GCA)P1 72 nt1.93□□□□□ -2.1
SUB1P54000 tC(GCA)P2tC(GCA)P2 72 nt1.93□□□□□ -2.1
SUB1P54000 YCL046WYCL046W 324 nt1.93□□□□□ -2.1
SUB1P54000 TOF2YKR010C 2316 nt1.92□□□□□ -2.1
SUB1P54000 YDR509WYDR509W 348 nt1.92□□□□□ -2.1
SUB1P54000 MSN5YDR335W 3675 nt1.92□□□□□ -2.1
SUB1P54000 RPL16AYIL133C 600 nt1.91□□□□□ -2.1
SUB1P54000 COF1YLL050C 432 nt1.91□□□□□ -2.1
SUB1P54000 YLR140WYLR140W 327 nt1.91□□□□□ -2.1
SUB1P54000 TSC3YBR058C-A 243 nt1.91□□□□□ -2.1
SUB1P54000 YOR093CYOR093C 4947 nt1.91□□□□□ -2.1
SUB1P54000 HSL1YKL101W 4557 nt1.9□□□□□ -2.1
SUB1P54000 VPS41YDR080W 2979 nt1.9□□□□□ -2.1
SUB1P54000 YER135CYER135C 393 nt1.9□□□□□ -2.11
SUB1P54000 EST2YLR318W 2655 nt1.89□□□□□ -2.11
SUB1P54000 YCR001WYCR001W 315 nt1.89□□□□□ -2.11
SUB1P54000 YHR130CYHR130C 336 nt1.89□□□□□ -2.11
SUB1P54000 YML009C-AYML009C-A 327 nt1.89□□□□□ -2.11
SUB1P54000 YNL303WYNL303W 348 nt1.89□□□□□ -2.11
SUB1P54000 SKP2YNL311C 2292 nt1.88□□□□□ -2.11
SUB1P54000 YDR250CYDR250C 276 nt1.88□□□□□ -2.11
SUB1P54000 YER023C-AYER023C-A 213 nt1.88□□□□□ -2.11
SUB1P54000 DGR2YKL121W 2559 nt1.87□□□□□ -2.11
SUB1P54000 RPL40BYKR094C 387 nt1.87□□□□□ -2.11
SUB1P54000 CHS1YNL192W 3396 nt1.87□□□□□ -2.11
SUB1P54000 VPS34YLR240W 2628 nt1.87□□□□□ -2.11
SUB1P54000 YER084W-AYER084W-A 513 nt1.86□□□□□ -2.11
SUB1P54000 YGR045CYGR045C 363 nt1.86□□□□□ -2.11
SUB1P54000 YOL013W-BYOL013W-B 291 nt1.86□□□□□ -2.11
SUB1P54000 HKR1YDR420W 5409 nt1.86□□□□□ -2.11
SUB1P54000 TRM732YMR259C 4263 nt1.86□□□□□ -2.11
SUB1P54000 YLR419WYLR419W 4308 nt1.85□□□□□ -2.11
SUB1P54000 YML108WYML108W 318 nt1.85□□□□□ -2.11
SUB1P54000 UFD2YDL190C 2886 nt1.84□□□□□ -2.11
SUB1P54000 GYP5YPL249C 2685 nt1.84□□□□□ -2.11
SUB1P54000 SWI5YDR146C 2130 nt1.84□□□□□ -2.11
SUB1P54000 SSK2YNR031C 4740 nt1.84□□□□□ -2.11
SUB1P54000 ATP7YKL016C 525 nt1.84□□□□□ -2.11
SUB1P54000 CLU1YMR012W 3834 nt1.84□□□□□ -2.11
SUB1P54000 YNL122CYNL122C 348 nt1.84□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 32.9 ms