Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 SHE9YDR393W 1371 nt1.38□□□□□ -2.19
SSU72P53538 snR79snR79 84 nt1.38□□□□□ -2.19
SSU72P53538 YER084W-AYER084W-A 513 nt1.38□□□□□ -2.19
SSU72P53538 LSO2YGR169C-A 279 nt1.38□□□□□ -2.19
SSU72P53538 PET123YOR158W 957 nt1.38□□□□□ -2.19
SSU72P53538 PIK1YNL267W 3201 nt1.38□□□□□ -2.19
SSU72P53538 MSS11YMR164C 2277 nt1.38□□□□□ -2.19
SSU72P53538 SKI3YPR189W 4299 nt1.38□□□□□ -2.19
SSU72P53538 VMR1YHL035C 4779 nt1.38□□□□□ -2.19
SSU72P53538 SGD1YLR336C 2700 nt1.38□□□□□ -2.19
SSU72P53538 SWT1YOR166C 1377 nt1.37□□□□□ -2.19
SSU72P53538 YEL030C-AYEL030C-A 315 nt1.37□□□□□ -2.19
SSU72P53538 BI2Q0110 1272 nt1.37□□□□□ -2.19
SSU72P53538 YGL069CYGL069C 465 nt1.37□□□□□ -2.19
SSU72P53538 RPF1YHR088W 888 nt1.37□□□□□ -2.19
SSU72P53538 YHR214W-AYHR214W-A 486 nt1.37□□□□□ -2.19
SSU72P53538 YAR068WYAR068W 486 nt1.37□□□□□ -2.19
SSU72P53538 YOR146WYOR146W 306 nt1.37□□□□□ -2.19
SSU72P53538 TSC3YBR058C-A 243 nt1.37□□□□□ -2.19
SSU72P53538 YPR039WYPR039W 336 nt1.37□□□□□ -2.19
SSU72P53538 FYV8YGR196C 2454 nt1.37□□□□□ -2.19
SSU72P53538 HMLALPHA2YCL067C 633 nt1.36□□□□□ -2.19
SSU72P53538 MATALPHA2YCR039C 633 nt1.36□□□□□ -2.19
SSU72P53538 IES5YER092W 378 nt1.36□□□□□ -2.19
SSU72P53538 YLR171WYLR171W 390 nt1.36□□□□□ -2.19
SSU72P53538 snR13snR13 124 nt1.36□□□□□ -2.19
SSU72P53538 ARP7YPR034W 1434 nt1.36□□□□□ -2.19
SSU72P53538 GPX2YBR244W 489 nt1.36□□□□□ -2.19
SSU72P53538 YCL023CYCL023C 348 nt1.36□□□□□ -2.19
SSU72P53538 MMS22YLR320W 4365 nt1.36□□□□□ -2.19
SSU72P53538 YOR192C-AYOR192C-A 1317 nt1.36□□□□□ -2.19
SSU72P53538 PET127YOR017W 2403 nt1.36□□□□□ -2.19
SSU72P53538 ASM4YDL088C 1587 nt1.35□□□□□ -2.19
SSU72P53538 CCH1YGR217W 6120 nt1.35□□□□□ -2.19
SSU72P53538 YCR001WYCR001W 315 nt1.35□□□□□ -2.19
SSU72P53538 YDR250CYDR250C 276 nt1.35□□□□□ -2.19
SSU72P53538 HSK3YKL138C-A 210 nt1.35□□□□□ -2.19
SSU72P53538 AIM29YKR074W 468 nt1.35□□□□□ -2.19
SSU72P53538 SEC21YNL287W 2808 nt1.35□□□□□ -2.19
SSU72P53538 YBP1YBR216C 2025 nt1.35□□□□□ -2.19
SSU72P53538 NOT5YPR072W 1683 nt1.35□□□□□ -2.19
SSU72P53538 MNL2YLR057W 2550 nt1.34□□□□□ -2.19
SSU72P53538 YER121WYER121W 345 nt1.34□□□□□ -2.19
SSU72P53538 YGR025WYGR025W 303 nt1.34□□□□□ -2.19
SSU72P53538 YLR269CYLR269C 351 nt1.34□□□□□ -2.19
SSU72P53538 YOR394C-AYOR394C-A 168 nt1.34□□□□□ -2.19
SSU72P53538 snR54snR54 86 nt1.34□□□□□ -2.19
SSU72P53538 BST1YFL025C 3090 nt1.34□□□□□ -2.2
SSU72P53538 SSK2YNR031C 4740 nt1.34□□□□□ -2.2
SSU72P53538 HMI1YOL095C 2121 nt1.34□□□□□ -2.2
SSU72P53538 YLR149CYLR149C 2193 nt1.34□□□□□ -2.2
SSU72P53538 NUP120YKL057C 3114 nt1.33□□□□□ -2.2
SSU72P53538 CDC24YAL041W 2565 nt1.33□□□□□ -2.2
SSU72P53538 ECL1YGR146C 636 nt1.33□□□□□ -2.2
SSU72P53538 CYB5YNL111C 363 nt1.33□□□□□ -2.2
SSU72P53538 YBR224WYBR224W 516 nt1.33□□□□□ -2.2
SSU72P53538 COX1Q0045 1605 nt1.33□□□□□ -2.2
SSU72P53538 MDM20YOL076W 2391 nt1.33□□□□□ -2.2
SSU72P53538 CTF4YPR135W 2784 nt1.32□□□□□ -2.2
SSU72P53538 SEY1YOR165W 2331 nt1.32□□□□□ -2.2
SSU72P53538 PLC1YPL268W 2610 nt1.32□□□□□ -2.2
SSU72P53538 YGL024WYGL024W 336 nt1.32□□□□□ -2.2
SSU72P53538 RPS18BYML026C 441 nt1.32□□□□□ -2.2
SSU72P53538 TOM22YNL131W 459 nt1.32□□□□□ -2.2
SSU72P53538 YPR146CYPR146C 330 nt1.32□□□□□ -2.2
SSU72P53538 SMY1YKL079W 1971 nt1.32□□□□□ -2.2
SSU72P53538 YSW1YBR148W 1830 nt1.31□□□□□ -2.2
SSU72P53538 SNF5YBR289W 2718 nt1.31□□□□□ -2.2
SSU72P53538 RBK1YCR036W 1002 nt1.31□□□□□ -2.2
SSU72P53538 HUR1YGL168W 333 nt1.31□□□□□ -2.2
SSU72P53538 YHR125WYHR125W 306 nt1.31□□□□□ -2.2
SSU72P53538 NBL1YHR199C-A 222 nt1.31□□□□□ -2.2
SSU72P53538 FCF2YLR051C 654 nt1.31□□□□□ -2.2
SSU72P53538 YBL083CYBL083C 426 nt1.31□□□□□ -2.2
SSU72P53538 FYV12YOR183W 390 nt1.31□□□□□ -2.2
SSU72P53538 EGD1YPL037C 474 nt1.31□□□□□ -2.2
SSU72P53538 HIR3YJR140C 4947 nt1.31□□□□□ -2.2
SSU72P53538 PEP3YLR148W 2757 nt1.31□□□□□ -2.2
SSU72P53538 BRR2YER172C 6492 nt1.31□□□□□ -2.2
SSU72P53538 BPH1YCR032W 6504 nt1.3□□□□□ -2.2
SSU72P53538 RVS161YCR009C 798 nt1.3□□□□□ -2.2
SSU72P53538 CMC2YBL059C-A 330 nt1.3□□□□□ -2.2
SSU72P53538 PGA1YNL158W 597 nt1.3□□□□□ -2.2
SSU72P53538 snR41snR41 95 nt1.3□□□□□ -2.2
SSU72P53538 FRK1YPL141C 2598 nt1.3□□□□□ -2.2
SSU72P53538 YCR102W-AYCR102W-A 198 nt1.29□□□□□ -2.2
SSU72P53538 YHR139C-AYHR139C-A 312 nt1.29□□□□□ -2.2
SSU72P53538 YJL007CYJL007C 315 nt1.29□□□□□ -2.2
SSU72P53538 VPS20YMR077C 666 nt1.29□□□□□ -2.2
SSU72P53538 YOR032W-AYOR032W-A 201 nt1.29□□□□□ -2.2
SSU72P53538 NOP53YPL146C 1368 nt1.29□□□□□ -2.2
SSU72P53538 IRE1YHR079C 3348 nt1.28□□□□□ -2.2
SSU72P53538 PBY1YBR094W 2262 nt1.28□□□□□ -2.2
SSU72P53538 YCR043CYCR043C 384 nt1.28□□□□□ -2.2
SSU72P53538 CDC36YDL165W 576 nt1.28□□□□□ -2.2
SSU72P53538 YHR052W-AYHR052W-A 195 nt1.28□□□□□ -2.2
SSU72P53538 YHR054W-AYHR054W-A 195 nt1.28□□□□□ -2.2
SSU72P53538 MCM22YJR135C 720 nt1.28□□□□□ -2.2
SSU72P53538 CDC33YOL139C 642 nt1.28□□□□□ -2.2
SSU72P53538 TRM3YDL112W 4311 nt1.28□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 58.4 ms