Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 GCN2YDR283C 4980 nt1.93□□□□□ -2.1
SSN8P47821 FKS1YLR342W 5631 nt1.93□□□□□ -2.1
SSN8P47821 YGL069CYGL069C 465 nt1.93□□□□□ -2.1
SSN8P47821 MSL1YIR009W 336 nt1.93□□□□□ -2.1
SSN8P47821 HSK3YKL138C-A 210 nt1.93□□□□□ -2.1
SSN8P47821 CDC53YDL132W 2448 nt1.93□□□□□ -2.1
SSN8P47821 MMS22YLR320W 4365 nt1.92□□□□□ -2.1
SSN8P47821 YGL024WYGL024W 336 nt1.92□□□□□ -2.1
SSN8P47821 YHL009W-AYHL009W-A 1242 nt1.92□□□□□ -2.1
SSN8P47821 PSY1YKL076C 384 nt1.92□□□□□ -2.1
SSN8P47821 YOR333CYOR333C 417 nt1.92□□□□□ -2.1
SSN8P47821 YBR224WYBR224W 516 nt1.92□□□□□ -2.1
SSN8P47821 VTC3YPL019C 2508 nt1.92□□□□□ -2.1
SSN8P47821 LHS1YKL073W 2646 nt1.92□□□□□ -2.1
SSN8P47821 SAP190YKR028W 3102 nt1.92□□□□□ -2.1
SSN8P47821 RTT107YHR154W 3213 nt1.92□□□□□ -2.1
SSN8P47821 TFC3YAL001C 3483 nt1.92□□□□□ -2.1
SSN8P47821 NOT5YPR072W 1683 nt1.91□□□□□ -2.1
SSN8P47821 YMR247W-AYMR247W-A 144 nt1.91□□□□□ -2.1
SSN8P47821 DGR1YNL130C-A 147 nt1.91□□□□□ -2.1
SSN8P47821 YBR012CYBR012C 420 nt1.91□□□□□ -2.1
SSN8P47821 RPL36BYPL249C-A 303 nt1.91□□□□□ -2.1
SSN8P47821 PUT3YKL015W 2940 nt1.91□□□□□ -2.1
SSN8P47821 IRC20YLR247C 4671 nt1.91□□□□□ -2.1
SSN8P47821 SGD1YLR336C 2700 nt1.91□□□□□ -2.1
SSN8P47821 APL5YPL195W 2799 nt1.9□□□□□ -2.1
SSN8P47821 TMA7YLR262C-A 195 nt1.9□□□□□ -2.11
SSN8P47821 YBL108WYBL108W 306 nt1.9□□□□□ -2.11
SSN8P47821 CDC27YBL084C 2277 nt1.9□□□□□ -2.11
SSN8P47821 RUD3YOR216C 1455 nt1.89□□□□□ -2.11
SSN8P47821 YHR028W-AYHR028W-A 321 nt1.89□□□□□ -2.11
SSN8P47821 YJL052C-AYJL052C-A 120 nt1.89□□□□□ -2.11
SSN8P47821 HIT1YJR055W 495 nt1.89□□□□□ -2.11
SSN8P47821 GPX2YBR244W 489 nt1.89□□□□□ -2.11
SSN8P47821 VPH1YOR270C 2523 nt1.89□□□□□ -2.11
SSN8P47821 DAS1YJL149W 1992 nt1.89□□□□□ -2.11
SSN8P47821 RTT101YJL047C 2529 nt1.88□□□□□ -2.11
SSN8P47821 RBK1YCR036W 1002 nt1.88□□□□□ -2.11
SSN8P47821 YDR286CYDR286C 345 nt1.88□□□□□ -2.11
SSN8P47821 HCH1YNL281W 462 nt1.88□□□□□ -2.11
SSN8P47821 YPR099CYPR099C 357 nt1.88□□□□□ -2.11
SSN8P47821 KOG1YHR186C 4674 nt1.88□□□□□ -2.11
SSN8P47821 YDL118WYDL118W 381 nt1.87□□□□□ -2.11
SSN8P47821 RPS24AYER074W 408 nt1.87□□□□□ -2.11
SSN8P47821 YPP1YGR198W 2454 nt1.87□□□□□ -2.11
SSN8P47821 tT(UGU)HtT(UGU)H 72 nt1.87□□□□□ -2.11
SSN8P47821 YLR149CYLR149C 2193 nt1.87□□□□□ -2.11
SSN8P47821 RPL26AYLR344W 384 nt1.87□□□□□ -2.11
SSN8P47821 YBL083CYBL083C 426 nt1.87□□□□□ -2.11
SSN8P47821 UTP22YGR090W 3714 nt1.87□□□□□ -2.11
SSN8P47821 YLR419WYLR419W 4308 nt1.87□□□□□ -2.11
SSN8P47821 BUD2YKL092C 3315 nt1.86□□□□□ -2.11
SSN8P47821 SOK2YMR016C 2358 nt1.86□□□□□ -2.11
SSN8P47821 YFR016CYFR016C 3702 nt1.86□□□□□ -2.11
SSN8P47821 YDL152WYDL152W 366 nt1.86□□□□□ -2.11
SSN8P47821 YAP6YDR259C 1152 nt1.86□□□□□ -2.11
SSN8P47821 YML009C-AYML009C-A 327 nt1.86□□□□□ -2.11
SSN8P47821 YOR121CYOR121C 306 nt1.86□□□□□ -2.11
SSN8P47821 TRL1YJL087C 2484 nt1.86□□□□□ -2.11
SSN8P47821 YJR098CYJR098C 1971 nt1.86□□□□□ -2.11
SSN8P47821 UFD4YKL010C 4452 nt1.85□□□□□ -2.11
SSN8P47821 BRE1YDL074C 2103 nt1.85□□□□□ -2.11
SSN8P47821 MNE1YOR350C 1992 nt1.85□□□□□ -2.11
SSN8P47821 YDR524W-CYDR524W-C 90 nt1.85□□□□□ -2.11
SSN8P47821 GCN4YEL009C 846 nt1.85□□□□□ -2.11
SSN8P47821 YHR210CYHR210C 1026 nt1.85□□□□□ -2.11
SSN8P47821 YIL066W-AYIL066W-A 444 nt1.85□□□□□ -2.11
SSN8P47821 YLR053CYLR053C 327 nt1.85□□□□□ -2.11
SSN8P47821 RPL32YBL092W 393 nt1.85□□□□□ -2.11
SSN8P47821 YOR029WYOR029W 336 nt1.85□□□□□ -2.11
SSN8P47821 GNT1YOR320C 1476 nt1.85□□□□□ -2.11
SSN8P47821 DFG16YOR030W 1860 nt1.85□□□□□ -2.11
SSN8P47821 CRM1YGR218W 3255 nt1.85□□□□□ -2.11
SSN8P47821 VPS8YAL002W 3825 nt1.85□□□□□ -2.11
SSN8P47821 YHR214C-BYHR214C-B 5382 nt1.85□□□□□ -2.11
SSN8P47821 DOT6YER088C 2013 nt1.84□□□□□ -2.11
SSN8P47821 RIC1YLR039C 3171 nt1.84□□□□□ -2.11
SSN8P47821 YDL011CYDL011C 324 nt1.84□□□□□ -2.11
SSN8P47821 YGL239CYGL239C 315 nt1.84□□□□□ -2.11
SSN8P47821 PAN3YKL025C 2040 nt1.84□□□□□ -2.12
SSN8P47821 SET2YJL168C 2202 nt1.83□□□□□ -2.12
SSN8P47821 YDL062WYDL062W 426 nt1.83□□□□□ -2.12
SSN8P47821 PHS1YJL097W 654 nt1.83□□□□□ -2.12
SSN8P47821 ISF1YMR081C 1017 nt1.83□□□□□ -2.12
SSN8P47821 PEP3YLR148W 2757 nt1.83□□□□□ -2.12
SSN8P47821 ATG9YDL149W 2994 nt1.82□□□□□ -2.12
SSN8P47821 MGA2YIR033W 3342 nt1.82□□□□□ -2.12
SSN8P47821 VTC1YER072W 390 nt1.82□□□□□ -2.12
SSN8P47821 YKR075W-AYKR075W-A 270 nt1.82□□□□□ -2.12
SSN8P47821 ALK2YBL009W 2031 nt1.82□□□□□ -2.12
SSN8P47821 MYO2YOR326W 4725 nt1.82□□□□□ -2.12
SSN8P47821 NAB6YML117W 3405 nt1.82□□□□□ -2.12
SSN8P47821 PLC1YPL268W 2610 nt1.82□□□□□ -2.12
SSN8P47821 PCF11YDR228C 1881 nt1.82□□□□□ -2.12
SSN8P47821 YHL046W-AYHL046W-A 327 nt1.81□□□□□ -2.12
SSN8P47821 RPA34YJL148W 702 nt1.81□□□□□ -2.12
SSN8P47821 PDR8YLR266C 2106 nt1.81□□□□□ -2.12
SSN8P47821 SEF1YBL066C 3447 nt1.81□□□□□ -2.12
SSN8P47821 CDC60YPL160W 3273 nt1.8□□□□□ -2.12
SSN8P47821 GRR1YJR090C 3456 nt1.8□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 21.8 ms