Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX6P35712 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SOX6P35712 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX6P35712 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX6P35712 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX6P35712 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.15■□□□□ 0.5
SOX6P35712 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
SOX6P35712 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX6P35712 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SOX6P35712 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX6P35712 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX6P35712 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SOX6P35712 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX6P35712 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SOX6P35712 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.14■□□□□ 0.5
SOX6P35712 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.14■□□□□ 0.5
SOX6P35712 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SOX6P35712 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
SOX6P35712 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.14■□□□□ 0.49
SOX6P35712 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOX6P35712 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOX6P35712 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOX6P35712 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOX6P35712 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.14■□□□□ 0.49
SOX6P35712 AC010141.3-201ENST00000456659 717 ntBASIC18.14■□□□□ 0.49
SOX6P35712 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.14■□□□□ 0.49
SOX6P35712 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOX6P35712 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOX6P35712 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SOX6P35712 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOX6P35712 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SOX6P35712 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SOX6P35712 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.14■□□□□ 0.49
SOX6P35712 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOX6P35712 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SOX6P35712 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOX6P35712 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SOX6P35712 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOX6P35712 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.14■□□□□ 0.49
SOX6P35712 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SOX6P35712 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SOX6P35712 AC133637.1-201ENST00000624115 1537 ntBASIC18.13■□□□□ 0.49
SOX6P35712 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SOX6P35712 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SOX6P35712 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SOX6P35712 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.13■□□□□ 0.49
SOX6P35712 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SOX6P35712 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
SOX6P35712 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SOX6P35712 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.13■□□□□ 0.49
SOX6P35712 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SOX6P35712 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.13■□□□□ 0.49
SOX6P35712 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SOX6P35712 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SOX6P35712 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SOX6P35712 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SOX6P35712 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SOX6P35712 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SOX6P35712 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.13■□□□□ 0.49
SOX6P35712 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SOX6P35712 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX6P35712 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX6P35712 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SOX6P35712 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX6P35712 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX6P35712 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX6P35712 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX6P35712 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SOX6P35712 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.12■□□□□ 0.49
SOX6P35712 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SOX6P35712 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
SOX6P35712 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.12■□□□□ 0.49
SOX6P35712 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.12■□□□□ 0.49
SOX6P35712 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.12■□□□□ 0.49
SOX6P35712 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX6P35712 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.12■□□□□ 0.49
SOX6P35712 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
SOX6P35712 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX6P35712 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SOX6P35712 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX6P35712 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX6P35712 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SOX6P35712 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX6P35712 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX6P35712 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
SOX6P35712 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX6P35712 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SOX6P35712 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.11■□□□□ 0.49
SOX6P35712 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SOX6P35712 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SOX6P35712 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SOX6P35712 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.11■□□□□ 0.49
SOX6P35712 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.11■□□□□ 0.49
SOX6P35712 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SOX6P35712 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SOX6P35712 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SOX6P35712 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.11■□□□□ 0.49
SOX6P35712 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SOX6P35712 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SOX6P35712 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms