Protein–RNA interactions for Protein: P28749

RBL1, Retinoblastoma-like protein 1, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBL1P28749 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RBL1P28749 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
RBL1P28749 DPP3P2-201ENST00000416030 1696 ntBASIC20.8■□□□□ 0.92
RBL1P28749 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RBL1P28749 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RBL1P28749 CNN2P6-201ENST00000439038 900 ntBASIC20.8■□□□□ 0.92
RBL1P28749 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.8■□□□□ 0.92
RBL1P28749 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RBL1P28749 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.8■□□□□ 0.92
RBL1P28749 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RBL1P28749 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
RBL1P28749 CYP21A1P-202ENST00000354927 1481 ntBASIC20.8■□□□□ 0.92
RBL1P28749 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RBL1P28749 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
RBL1P28749 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RBL1P28749 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RBL1P28749 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RBL1P28749 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RBL1P28749 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RBL1P28749 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RBL1P28749 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RBL1P28749 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RBL1P28749 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RBL1P28749 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RBL1P28749 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RBL1P28749 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.79■□□□□ 0.92
RBL1P28749 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.79■□□□□ 0.92
RBL1P28749 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.79■□□□□ 0.92
RBL1P28749 AL162412.1-201ENST00000567129 965 ntBASIC20.79■□□□□ 0.92
RBL1P28749 MIR5787-201ENST00000611784 55 ntBASIC20.79■□□□□ 0.92
RBL1P28749 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RBL1P28749 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RBL1P28749 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RBL1P28749 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RBL1P28749 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.79■□□□□ 0.92
RBL1P28749 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.79■□□□□ 0.92
RBL1P28749 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RBL1P28749 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RBL1P28749 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.79■□□□□ 0.92
RBL1P28749 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RBL1P28749 AC087633.2-202ENST00000565166 1439 ntBASIC20.78■□□□□ 0.92
RBL1P28749 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.78■□□□□ 0.92
RBL1P28749 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.78■□□□□ 0.92
RBL1P28749 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RBL1P28749 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.78■□□□□ 0.92
RBL1P28749 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RBL1P28749 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RBL1P28749 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RBL1P28749 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.78■□□□□ 0.92
RBL1P28749 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.78■□□□□ 0.92
RBL1P28749 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RBL1P28749 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.78■□□□□ 0.92
RBL1P28749 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.78■□□□□ 0.92
RBL1P28749 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RBL1P28749 AL356652.1-201ENST00000615962 565 ntBASIC20.78■□□□□ 0.92
RBL1P28749 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.78■□□□□ 0.92
RBL1P28749 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RBL1P28749 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RBL1P28749 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.78■□□□□ 0.92
RBL1P28749 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RBL1P28749 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RBL1P28749 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RBL1P28749 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RBL1P28749 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RBL1P28749 AC068338.2-201ENST00000563278 1430 ntBASIC20.78■□□□□ 0.92
RBL1P28749 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RBL1P28749 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RBL1P28749 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RBL1P28749 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RBL1P28749 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RBL1P28749 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.77■□□□□ 0.92
RBL1P28749 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.77■□□□□ 0.92
RBL1P28749 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RBL1P28749 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.77■□□□□ 0.92
RBL1P28749 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RBL1P28749 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
RBL1P28749 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RBL1P28749 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.77■□□□□ 0.92
RBL1P28749 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.77■□□□□ 0.91
RBL1P28749 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RBL1P28749 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.77■□□□□ 0.91
RBL1P28749 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RBL1P28749 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.77■□□□□ 0.91
RBL1P28749 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RBL1P28749 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RBL1P28749 TCF3P1-201ENST00000423021 1937 ntBASIC20.76■□□□□ 0.91
RBL1P28749 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.76■□□□□ 0.91
RBL1P28749 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.76■□□□□ 0.91
RBL1P28749 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RBL1P28749 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.76■□□□□ 0.91
RBL1P28749 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RBL1P28749 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RBL1P28749 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RBL1P28749 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RBL1P28749 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.76■□□□□ 0.91
RBL1P28749 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.76■□□□□ 0.91
RBL1P28749 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.76■□□□□ 0.91
RBL1P28749 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.76■□□□□ 0.91
RBL1P28749 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RBL1P28749 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms