Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC27.01■■□□□ 1.91
CSB-PGBD3P0DP91 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC27■■□□□ 1.91
CSB-PGBD3P0DP91 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
CSB-PGBD3P0DP91 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC27■■□□□ 1.91
CSB-PGBD3P0DP91 AL353807.1-201ENST00000427475 662 ntBASIC27■■□□□ 1.91
CSB-PGBD3P0DP91 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC27■■□□□ 1.91
CSB-PGBD3P0DP91 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC27■■□□□ 1.91
CSB-PGBD3P0DP91 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC27■■□□□ 1.91
CSB-PGBD3P0DP91 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC27■■□□□ 1.91
CSB-PGBD3P0DP91 DECR2-212ENST00000627716 352 ntTSL 2 BASIC27■■□□□ 1.91
CSB-PGBD3P0DP91 GOLGA2P6-201ENST00000340929 2049 ntBASIC27■■□□□ 1.91
CSB-PGBD3P0DP91 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
CSB-PGBD3P0DP91 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CSB-PGBD3P0DP91 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC27■■□□□ 1.91
CSB-PGBD3P0DP91 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
CSB-PGBD3P0DP91 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CSB-PGBD3P0DP91 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC26.99■■□□□ 1.91
CSB-PGBD3P0DP91 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CSB-PGBD3P0DP91 KRT18P35-201ENST00000510488 1269 ntBASIC26.99■■□□□ 1.91
CSB-PGBD3P0DP91 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CSB-PGBD3P0DP91 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC26.99■■□□□ 1.91
CSB-PGBD3P0DP91 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CSB-PGBD3P0DP91 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.99■■□□□ 1.91
CSB-PGBD3P0DP91 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CSB-PGBD3P0DP91 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
CSB-PGBD3P0DP91 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
CSB-PGBD3P0DP91 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CSB-PGBD3P0DP91 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CSB-PGBD3P0DP91 F2R-202ENST00000505600 442 ntTSL 2 BASIC26.98■■□□□ 1.91
CSB-PGBD3P0DP91 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC26.98■■□□□ 1.91
CSB-PGBD3P0DP91 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC26.98■■□□□ 1.91
CSB-PGBD3P0DP91 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC26.98■■□□□ 1.91
CSB-PGBD3P0DP91 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CSB-PGBD3P0DP91 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
CSB-PGBD3P0DP91 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CSB-PGBD3P0DP91 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC26.98■■□□□ 1.91
CSB-PGBD3P0DP91 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CSB-PGBD3P0DP91 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CSB-PGBD3P0DP91 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CSB-PGBD3P0DP91 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CSB-PGBD3P0DP91 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC26.98■■□□□ 1.91
CSB-PGBD3P0DP91 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC26.98■■□□□ 1.91
CSB-PGBD3P0DP91 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CSB-PGBD3P0DP91 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
CSB-PGBD3P0DP91 ARMC10P1-201ENST00000313754 855 ntBASIC26.97■■□□□ 1.91
CSB-PGBD3P0DP91 MIR6786-201ENST00000616843 113 ntBASIC26.97■■□□□ 1.91
CSB-PGBD3P0DP91 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CSB-PGBD3P0DP91 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC26.97■■□□□ 1.91
CSB-PGBD3P0DP91 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC26.97■■□□□ 1.91
CSB-PGBD3P0DP91 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
CSB-PGBD3P0DP91 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
CSB-PGBD3P0DP91 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CSB-PGBD3P0DP91 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC26.97■■□□□ 1.91
CSB-PGBD3P0DP91 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CSB-PGBD3P0DP91 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
CSB-PGBD3P0DP91 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CSB-PGBD3P0DP91 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC26.96■■□□□ 1.91
CSB-PGBD3P0DP91 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CSB-PGBD3P0DP91 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CSB-PGBD3P0DP91 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
CSB-PGBD3P0DP91 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC26.96■■□□□ 1.91
CSB-PGBD3P0DP91 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC26.96■■□□□ 1.91
CSB-PGBD3P0DP91 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC26.96■■□□□ 1.91
CSB-PGBD3P0DP91 AC073195.1-201ENST00000607241 877 ntBASIC26.96■■□□□ 1.91
CSB-PGBD3P0DP91 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC26.96■■□□□ 1.91
CSB-PGBD3P0DP91 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CSB-PGBD3P0DP91 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CSB-PGBD3P0DP91 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CSB-PGBD3P0DP91 GALC-202ENST00000393568 2054 ntTSL 2 BASIC26.96■■□□□ 1.91
CSB-PGBD3P0DP91 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
CSB-PGBD3P0DP91 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC26.96■■□□□ 1.91
CSB-PGBD3P0DP91 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CSB-PGBD3P0DP91 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC26.96■■□□□ 1.91
CSB-PGBD3P0DP91 SRI-203ENST00000419179 1307 ntTSL 2 BASIC26.95■■□□□ 1.91
CSB-PGBD3P0DP91 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
CSB-PGBD3P0DP91 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC26.95■■□□□ 1.91
CSB-PGBD3P0DP91 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CSB-PGBD3P0DP91 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
CSB-PGBD3P0DP91 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.9
CSB-PGBD3P0DP91 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CSB-PGBD3P0DP91 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CSB-PGBD3P0DP91 FDX2-207ENST00000494368 584 ntTSL 4 BASIC26.95■■□□□ 1.9
CSB-PGBD3P0DP91 AC023632.3-201ENST00000521633 145 ntBASIC26.95■■□□□ 1.9
CSB-PGBD3P0DP91 PNN-205ENST00000556530 601 ntTSL 2 BASIC26.95■■□□□ 1.9
CSB-PGBD3P0DP91 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CSB-PGBD3P0DP91 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC26.95■■□□□ 1.9
CSB-PGBD3P0DP91 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC26.94■■□□□ 1.9
CSB-PGBD3P0DP91 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC26.94■■□□□ 1.9
CSB-PGBD3P0DP91 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CSB-PGBD3P0DP91 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CSB-PGBD3P0DP91 NT5C-211ENST00000582170 653 ntTSL 3 BASIC26.94■■□□□ 1.9
CSB-PGBD3P0DP91 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC26.94■■□□□ 1.9
CSB-PGBD3P0DP91 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC26.94■■□□□ 1.9
CSB-PGBD3P0DP91 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC26.94■■□□□ 1.9
CSB-PGBD3P0DP91 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
CSB-PGBD3P0DP91 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CSB-PGBD3P0DP91 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CSB-PGBD3P0DP91 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CSB-PGBD3P0DP91 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CSB-PGBD3P0DP91 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms