Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQB2P05538 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQB2P05538 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQB2P05538 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQB2P05538 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
HLA-DQB2P05538 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.59■□□□□ 0.89
HLA-DQB2P05538 SMG8-203ENST00000578922 2178 ntBASIC20.59■□□□□ 0.89
HLA-DQB2P05538 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQB2P05538 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQB2P05538 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.59■□□□□ 0.89
HLA-DQB2P05538 DPP3P2-201ENST00000416030 1696 ntBASIC20.59■□□□□ 0.89
HLA-DQB2P05538 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQB2P05538 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.59■□□□□ 0.89
HLA-DQB2P05538 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQB2P05538 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQB2P05538 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.59■□□□□ 0.89
HLA-DQB2P05538 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
HLA-DQB2P05538 AL589743.5-201ENST00000616611 1050 ntBASIC20.59■□□□□ 0.89
HLA-DQB2P05538 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQB2P05538 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQB2P05538 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQB2P05538 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
HLA-DQB2P05538 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQB2P05538 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQB2P05538 AL162377.1-201ENST00000618844 1793 ntBASIC20.59■□□□□ 0.89
HLA-DQB2P05538 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DQB2P05538 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DQB2P05538 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
HLA-DQB2P05538 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DQB2P05538 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DQB2P05538 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DQB2P05538 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DQB2P05538 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DQB2P05538 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.58■□□□□ 0.89
HLA-DQB2P05538 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.58■□□□□ 0.89
HLA-DQB2P05538 GPX1P1-201ENST00000388829 606 ntBASIC20.58■□□□□ 0.89
HLA-DQB2P05538 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
HLA-DQB2P05538 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
HLA-DQB2P05538 BX276092.2-201ENST00000417668 665 ntBASIC20.58■□□□□ 0.89
HLA-DQB2P05538 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.58■□□□□ 0.89
HLA-DQB2P05538 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.58■□□□□ 0.89
HLA-DQB2P05538 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.58■□□□□ 0.89
HLA-DQB2P05538 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
HLA-DQB2P05538 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DQB2P05538 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
HLA-DQB2P05538 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DQB2P05538 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQB2P05538 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQB2P05538 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.57■□□□□ 0.88
HLA-DQB2P05538 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQB2P05538 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
HLA-DQB2P05538 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQB2P05538 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQB2P05538 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQB2P05538 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQB2P05538 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQB2P05538 TSPY6P-201ENST00000448518 926 ntBASIC20.57■□□□□ 0.88
HLA-DQB2P05538 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.57■□□□□ 0.88
HLA-DQB2P05538 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQB2P05538 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HLA-DQB2P05538 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQB2P05538 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQB2P05538 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQB2P05538 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQB2P05538 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HLA-DQB2P05538 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
HLA-DQB2P05538 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQB2P05538 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQB2P05538 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQB2P05538 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQB2P05538 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.56■□□□□ 0.88
HLA-DQB2P05538 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.56■□□□□ 0.88
HLA-DQB2P05538 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQB2P05538 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQB2P05538 LSM12P1-201ENST00000411836 588 ntBASIC20.56■□□□□ 0.88
HLA-DQB2P05538 MIPEPP3-201ENST00000412105 444 ntBASIC20.56■□□□□ 0.88
HLA-DQB2P05538 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQB2P05538 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.56■□□□□ 0.88
HLA-DQB2P05538 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.56■□□□□ 0.88
HLA-DQB2P05538 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQB2P05538 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQB2P05538 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.56■□□□□ 0.88
HLA-DQB2P05538 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.56■□□□□ 0.88
HLA-DQB2P05538 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQB2P05538 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQB2P05538 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQB2P05538 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQB2P05538 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQB2P05538 AC073130.3-201ENST00000624389 2278 ntBASIC20.56■□□□□ 0.88
HLA-DQB2P05538 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQB2P05538 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQB2P05538 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.56■□□□□ 0.88
HLA-DQB2P05538 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DQB2P05538 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
HLA-DQB2P05538 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
HLA-DQB2P05538 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DQB2P05538 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DQB2P05538 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HLA-DQB2P05538 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.55■□□□□ 0.88
HLA-DQB2P05538 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms