Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RTN3O95197 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.36■■□□□ 1.01
RTN3O95197 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTN3O95197 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
RTN3O95197 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
RTN3O95197 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTN3O95197 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTN3O95197 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
RTN3O95197 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTN3O95197 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
RTN3O95197 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTN3O95197 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.35■■□□□ 1.01
RTN3O95197 AC026310.3-201ENST00000625186 2373 ntBASIC21.35■■□□□ 1.01
RTN3O95197 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RTN3O95197 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RTN3O95197 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.35■■□□□ 1.01
RTN3O95197 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTN3O95197 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.35■■□□□ 1.01
RTN3O95197 KRT8P36-201ENST00000489121 1440 ntBASIC21.35■■□□□ 1.01
RTN3O95197 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RTN3O95197 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RTN3O95197 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTN3O95197 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RTN3O95197 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTN3O95197 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTN3O95197 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTN3O95197 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTN3O95197 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.34■■□□□ 1.01
RTN3O95197 AC026366.1-201ENST00000488803 879 ntBASIC21.34■■□□□ 1.01
RTN3O95197 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.34■■□□□ 1.01
RTN3O95197 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.34■■□□□ 1.01
RTN3O95197 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RTN3O95197 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.34■■□□□ 1.01
RTN3O95197 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RTN3O95197 ITM2C-210ENST00000620962 501 ntBASIC21.34■■□□□ 1.01
RTN3O95197 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTN3O95197 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RTN3O95197 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
RTN3O95197 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.34■■□□□ 1.01
RTN3O95197 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RTN3O95197 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RTN3O95197 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.33■■□□□ 1.01
RTN3O95197 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RTN3O95197 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RTN3O95197 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RTN3O95197 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.33■■□□□ 1.01
RTN3O95197 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
RTN3O95197 AP003097.1-201ENST00000530657 1135 ntBASIC21.33■■□□□ 1.01
RTN3O95197 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
RTN3O95197 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RTN3O95197 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
RTN3O95197 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RTN3O95197 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.33■■□□□ 1
RTN3O95197 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTN3O95197 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.32■■□□□ 1
RTN3O95197 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RTN3O95197 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.32■■□□□ 1
RTN3O95197 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.32■■□□□ 1
RTN3O95197 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTN3O95197 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTN3O95197 KRT18P29-201ENST00000397031 1267 ntBASIC21.32■■□□□ 1
RTN3O95197 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.32■■□□□ 1
RTN3O95197 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.32■■□□□ 1
RTN3O95197 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.32■■□□□ 1
RTN3O95197 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.32■■□□□ 1
RTN3O95197 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTN3O95197 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.32■■□□□ 1
RTN3O95197 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.32■■□□□ 1
RTN3O95197 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTN3O95197 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RTN3O95197 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTN3O95197 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.32■■□□□ 1
RTN3O95197 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
RTN3O95197 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.31■■□□□ 1
RTN3O95197 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTN3O95197 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTN3O95197 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RTN3O95197 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.31■■□□□ 1
RTN3O95197 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.31■■□□□ 1
RTN3O95197 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTN3O95197 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.31■■□□□ 1
RTN3O95197 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTN3O95197 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RTN3O95197 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RTN3O95197 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTN3O95197 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.31■■□□□ 1
RTN3O95197 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.31■■□□□ 1
RTN3O95197 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.31■■□□□ 1
RTN3O95197 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.31■■□□□ 1
RTN3O95197 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.31■■□□□ 1
RTN3O95197 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
RTN3O95197 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.31■■□□□ 1
RTN3O95197 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.31■■□□□ 1
RTN3O95197 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RTN3O95197 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTN3O95197 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
RTN3O95197 PLK5-205ENST00000642079 1969 ntBASIC21.3■■□□□ 1
RTN3O95197 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.3■■□□□ 1
RTN3O95197 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.3■■□□□ 1
RTN3O95197 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms