Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
ZNF254O75437 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF254O75437 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.92■□□□□ 0.46
ZNF254O75437 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF254O75437 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
ZNF254O75437 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.91■□□□□ 0.46
ZNF254O75437 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.91■□□□□ 0.46
ZNF254O75437 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.91■□□□□ 0.46
ZNF254O75437 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.91■□□□□ 0.46
ZNF254O75437 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF254O75437 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF254O75437 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.91■□□□□ 0.46
ZNF254O75437 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.91■□□□□ 0.46
ZNF254O75437 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.91■□□□□ 0.46
ZNF254O75437 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ZNF254O75437 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.91■□□□□ 0.46
ZNF254O75437 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.91■□□□□ 0.46
ZNF254O75437 TERF1P2-201ENST00000583350 1212 ntBASIC17.91■□□□□ 0.46
ZNF254O75437 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.91■□□□□ 0.46
ZNF254O75437 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ZNF254O75437 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF254O75437 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ZNF254O75437 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
ZNF254O75437 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF254O75437 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF254O75437 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF254O75437 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.9■□□□□ 0.46
ZNF254O75437 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF254O75437 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
ZNF254O75437 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.9■□□□□ 0.46
ZNF254O75437 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
ZNF254O75437 TCF3P1-201ENST00000423021 1937 ntBASIC17.9■□□□□ 0.46
ZNF254O75437 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF254O75437 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.9■□□□□ 0.46
ZNF254O75437 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
ZNF254O75437 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF254O75437 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
ZNF254O75437 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF254O75437 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF254O75437 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF254O75437 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
ZNF254O75437 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ZNF254O75437 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.89■□□□□ 0.46
ZNF254O75437 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF254O75437 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.89■□□□□ 0.45
ZNF254O75437 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.89■□□□□ 0.45
ZNF254O75437 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF254O75437 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF254O75437 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF254O75437 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.89■□□□□ 0.45
ZNF254O75437 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF254O75437 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF254O75437 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
ZNF254O75437 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF254O75437 YBX1P1-201ENST00000445822 960 ntBASIC17.89■□□□□ 0.45
ZNF254O75437 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.89■□□□□ 0.45
ZNF254O75437 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.89■□□□□ 0.45
ZNF254O75437 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
ZNF254O75437 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF254O75437 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
ZNF254O75437 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF254O75437 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ZNF254O75437 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF254O75437 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF254O75437 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.89■□□□□ 0.45
ZNF254O75437 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF254O75437 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF254O75437 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
ZNF254O75437 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF254O75437 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.88■□□□□ 0.45
ZNF254O75437 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF254O75437 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF254O75437 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF254O75437 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.88■□□□□ 0.45
ZNF254O75437 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF254O75437 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ZNF254O75437 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.88■□□□□ 0.45
ZNF254O75437 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.88■□□□□ 0.45
ZNF254O75437 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF254O75437 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.88■□□□□ 0.45
ZNF254O75437 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ZNF254O75437 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF254O75437 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF254O75437 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF254O75437 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF254O75437 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.88■□□□□ 0.45
ZNF254O75437 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.88■□□□□ 0.45
ZNF254O75437 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.88■□□□□ 0.45
ZNF254O75437 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF254O75437 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.88■□□□□ 0.45
ZNF254O75437 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
ZNF254O75437 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF254O75437 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF254O75437 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.87■□□□□ 0.45
ZNF254O75437 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF254O75437 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.87■□□□□ 0.45
ZNF254O75437 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
ZNF254O75437 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF254O75437 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF254O75437 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms