Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
GFRA3O60609 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.89■□□□□ 0.77
GFRA3O60609 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
GFRA3O60609 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.89■□□□□ 0.77
GFRA3O60609 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GFRA3O60609 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.89■□□□□ 0.77
GFRA3O60609 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
GFRA3O60609 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.89■□□□□ 0.77
GFRA3O60609 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.89■□□□□ 0.77
GFRA3O60609 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GFRA3O60609 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
GFRA3O60609 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
GFRA3O60609 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GFRA3O60609 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
GFRA3O60609 AC003102.1-202ENST00000563394 1796 ntBASIC19.88■□□□□ 0.77
GFRA3O60609 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GFRA3O60609 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.88■□□□□ 0.77
GFRA3O60609 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GFRA3O60609 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
GFRA3O60609 TSPY21P-201ENST00000433481 731 ntBASIC19.88■□□□□ 0.77
GFRA3O60609 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.88■□□□□ 0.77
GFRA3O60609 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.88■□□□□ 0.77
GFRA3O60609 TSPY23P-201ENST00000440136 739 ntBASIC19.88■□□□□ 0.77
GFRA3O60609 KRT17P6-201ENST00000453795 1220 ntBASIC19.88■□□□□ 0.77
GFRA3O60609 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.88■□□□□ 0.77
GFRA3O60609 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.88■□□□□ 0.77
GFRA3O60609 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
GFRA3O60609 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.88■□□□□ 0.77
GFRA3O60609 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.88■□□□□ 0.77
GFRA3O60609 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.88■□□□□ 0.77
GFRA3O60609 SLC25A1P4-201ENST00000567977 778 ntBASIC19.88■□□□□ 0.77
GFRA3O60609 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GFRA3O60609 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GFRA3O60609 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GFRA3O60609 AL031985.4-201ENST00000642138 673 ntBASIC19.88■□□□□ 0.77
GFRA3O60609 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GFRA3O60609 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
GFRA3O60609 C11orf96-202ENST00000528572 1834 ntBASIC19.88■□□□□ 0.77
GFRA3O60609 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GFRA3O60609 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GFRA3O60609 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GFRA3O60609 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.87■□□□□ 0.77
GFRA3O60609 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GFRA3O60609 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GFRA3O60609 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.87■□□□□ 0.77
GFRA3O60609 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.87■□□□□ 0.77
GFRA3O60609 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GFRA3O60609 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GFRA3O60609 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.87■□□□□ 0.77
GFRA3O60609 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.87■□□□□ 0.77
GFRA3O60609 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GFRA3O60609 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
GFRA3O60609 AC116050.2-201ENST00000612102 1779 ntBASIC19.87■□□□□ 0.77
GFRA3O60609 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
GFRA3O60609 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
GFRA3O60609 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GFRA3O60609 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
GFRA3O60609 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.86■□□□□ 0.77
GFRA3O60609 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.86■□□□□ 0.77
GFRA3O60609 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.86■□□□□ 0.77
GFRA3O60609 AC124283.5-201ENST00000624661 1809 ntBASIC19.86■□□□□ 0.77
GFRA3O60609 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GFRA3O60609 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GFRA3O60609 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GFRA3O60609 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
GFRA3O60609 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GFRA3O60609 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GFRA3O60609 HOMER2P1-201ENST00000455653 964 ntBASIC19.86■□□□□ 0.77
GFRA3O60609 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.86■□□□□ 0.77
GFRA3O60609 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.86■□□□□ 0.77
GFRA3O60609 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.86■□□□□ 0.77
GFRA3O60609 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.86■□□□□ 0.77
GFRA3O60609 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GFRA3O60609 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
GFRA3O60609 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
GFRA3O60609 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GFRA3O60609 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.86■□□□□ 0.77
GFRA3O60609 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
GFRA3O60609 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
GFRA3O60609 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.85■□□□□ 0.77
GFRA3O60609 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GFRA3O60609 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GFRA3O60609 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.85■□□□□ 0.77
GFRA3O60609 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.85■□□□□ 0.77
GFRA3O60609 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GFRA3O60609 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.85■□□□□ 0.77
GFRA3O60609 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.85■□□□□ 0.77
GFRA3O60609 DGCR10-201ENST00000609839 495 ntBASIC19.85■□□□□ 0.77
GFRA3O60609 AC139530.3-201ENST00000620344 690 ntBASIC19.85■□□□□ 0.77
GFRA3O60609 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GFRA3O60609 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GFRA3O60609 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GFRA3O60609 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GFRA3O60609 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
GFRA3O60609 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GFRA3O60609 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.84■□□□□ 0.77
GFRA3O60609 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GFRA3O60609 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GFRA3O60609 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.84■□□□□ 0.77
GFRA3O60609 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms