Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SYNCRIPO60506 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SYNCRIPO60506 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.7■□□□□ 0.9
SYNCRIPO60506 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.7■□□□□ 0.9
SYNCRIPO60506 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.7■□□□□ 0.9
SYNCRIPO60506 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SYNCRIPO60506 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYNCRIPO60506 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYNCRIPO60506 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYNCRIPO60506 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.7■□□□□ 0.9
SYNCRIPO60506 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.7■□□□□ 0.9
SYNCRIPO60506 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.7■□□□□ 0.9
SYNCRIPO60506 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNCRIPO60506 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SYNCRIPO60506 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNCRIPO60506 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNCRIPO60506 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNCRIPO60506 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.69■□□□□ 0.9
SYNCRIPO60506 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNCRIPO60506 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNCRIPO60506 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SYNCRIPO60506 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
SYNCRIPO60506 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.69■□□□□ 0.9
SYNCRIPO60506 FAM197Y4-202ENST00000622692 608 ntBASIC20.69■□□□□ 0.9
SYNCRIPO60506 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SYNCRIPO60506 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SYNCRIPO60506 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.69■□□□□ 0.9
SYNCRIPO60506 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.69■□□□□ 0.9
SYNCRIPO60506 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.69■□□□□ 0.9
SYNCRIPO60506 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SYNCRIPO60506 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SYNCRIPO60506 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
SYNCRIPO60506 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.68■□□□□ 0.9
SYNCRIPO60506 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNCRIPO60506 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNCRIPO60506 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.68■□□□□ 0.9
SYNCRIPO60506 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.68■□□□□ 0.9
SYNCRIPO60506 RPS2P4-201ENST00000476944 856 ntBASIC20.68■□□□□ 0.9
SYNCRIPO60506 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.68■□□□□ 0.9
SYNCRIPO60506 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.68■□□□□ 0.9
SYNCRIPO60506 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.68■□□□□ 0.9
SYNCRIPO60506 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.68■□□□□ 0.9
SYNCRIPO60506 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.68■□□□□ 0.9
SYNCRIPO60506 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.68■□□□□ 0.9
SYNCRIPO60506 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SYNCRIPO60506 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.68■□□□□ 0.9
SYNCRIPO60506 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.68■□□□□ 0.9
SYNCRIPO60506 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
SYNCRIPO60506 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SYNCRIPO60506 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNCRIPO60506 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SYNCRIPO60506 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SYNCRIPO60506 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SYNCRIPO60506 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYNCRIPO60506 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SYNCRIPO60506 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYNCRIPO60506 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.67■□□□□ 0.9
SYNCRIPO60506 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SYNCRIPO60506 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SYNCRIPO60506 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.67■□□□□ 0.9
SYNCRIPO60506 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SYNCRIPO60506 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SYNCRIPO60506 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.67■□□□□ 0.9
SYNCRIPO60506 UBE2SP1-201ENST00000450587 669 ntBASIC20.67■□□□□ 0.9
SYNCRIPO60506 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.67■□□□□ 0.9
SYNCRIPO60506 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SYNCRIPO60506 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.67■□□□□ 0.9
SYNCRIPO60506 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.66■□□□□ 0.9
SYNCRIPO60506 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNCRIPO60506 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNCRIPO60506 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNCRIPO60506 C1QBPP2-201ENST00000528754 825 ntBASIC20.66■□□□□ 0.9
SYNCRIPO60506 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
SYNCRIPO60506 AL356652.1-201ENST00000615962 565 ntBASIC20.66■□□□□ 0.9
SYNCRIPO60506 AL359736.2-201ENST00000621992 437 ntBASIC20.66■□□□□ 0.9
SYNCRIPO60506 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.66■□□□□ 0.9
SYNCRIPO60506 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SYNCRIPO60506 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNCRIPO60506 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SYNCRIPO60506 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SYNCRIPO60506 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SYNCRIPO60506 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNCRIPO60506 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNCRIPO60506 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYNCRIPO60506 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SYNCRIPO60506 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.65■□□□□ 0.9
SYNCRIPO60506 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.65■□□□□ 0.9
SYNCRIPO60506 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
SYNCRIPO60506 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYNCRIPO60506 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.65■□□□□ 0.9
SYNCRIPO60506 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SYNCRIPO60506 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.65■□□□□ 0.9
SYNCRIPO60506 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
SYNCRIPO60506 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SYNCRIPO60506 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNCRIPO60506 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNCRIPO60506 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNCRIPO60506 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
SYNCRIPO60506 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.64■□□□□ 0.89
SYNCRIPO60506 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms