Protein–RNA interactions for Protein: O60393

NOBOX, Homeobox protein NOBOX, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOBOXO60393 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NOBOXO60393 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.05■□□□□ 0.8
NOBOXO60393 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.05■□□□□ 0.8
NOBOXO60393 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.05■□□□□ 0.8
NOBOXO60393 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.05■□□□□ 0.8
NOBOXO60393 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NOBOXO60393 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NOBOXO60393 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
NOBOXO60393 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
NOBOXO60393 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NOBOXO60393 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NOBOXO60393 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
NOBOXO60393 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.04■□□□□ 0.8
NOBOXO60393 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
NOBOXO60393 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
NOBOXO60393 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
NOBOXO60393 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NOBOXO60393 AC026366.1-201ENST00000488803 879 ntBASIC20.04■□□□□ 0.8
NOBOXO60393 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.04■□□□□ 0.8
NOBOXO60393 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.04■□□□□ 0.8
NOBOXO60393 AC060766.5-201ENST00000590539 871 ntBASIC20.04■□□□□ 0.8
NOBOXO60393 AC006058.3-201ENST00000606217 1069 ntBASIC20.04■□□□□ 0.8
NOBOXO60393 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.04■□□□□ 0.8
NOBOXO60393 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NOBOXO60393 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NOBOXO60393 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NOBOXO60393 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
NOBOXO60393 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NOBOXO60393 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NOBOXO60393 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NOBOXO60393 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.03■□□□□ 0.8
NOBOXO60393 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
NOBOXO60393 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NOBOXO60393 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NOBOXO60393 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.03■□□□□ 0.8
NOBOXO60393 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NOBOXO60393 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.03■□□□□ 0.8
NOBOXO60393 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NOBOXO60393 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NOBOXO60393 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.03■□□□□ 0.8
NOBOXO60393 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.03■□□□□ 0.8
NOBOXO60393 AP003097.1-201ENST00000530657 1135 ntBASIC20.03■□□□□ 0.8
NOBOXO60393 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.03■□□□□ 0.8
NOBOXO60393 HLA-B-256ENST00000639848 1089 ntBASIC20.03■□□□□ 0.8
NOBOXO60393 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NOBOXO60393 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NOBOXO60393 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NOBOXO60393 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.03■□□□□ 0.8
NOBOXO60393 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NOBOXO60393 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NOBOXO60393 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NOBOXO60393 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
NOBOXO60393 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.02■□□□□ 0.8
NOBOXO60393 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.02■□□□□ 0.8
NOBOXO60393 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.02■□□□□ 0.8
NOBOXO60393 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NOBOXO60393 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NOBOXO60393 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
NOBOXO60393 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.02■□□□□ 0.8
NOBOXO60393 AC128676.1-201ENST00000454392 318 ntBASIC20.02■□□□□ 0.8
NOBOXO60393 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.02■□□□□ 0.8
NOBOXO60393 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NOBOXO60393 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
NOBOXO60393 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NOBOXO60393 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NOBOXO60393 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NOBOXO60393 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NOBOXO60393 AC092667.1-201ENST00000434301 2586 ntBASIC20.01■□□□□ 0.79
NOBOXO60393 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
NOBOXO60393 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NOBOXO60393 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NOBOXO60393 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.01■□□□□ 0.79
NOBOXO60393 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NOBOXO60393 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
NOBOXO60393 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NOBOXO60393 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.01■□□□□ 0.79
NOBOXO60393 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NOBOXO60393 AC105020.6-201ENST00000621523 1217 ntBASIC20.01■□□□□ 0.79
NOBOXO60393 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NOBOXO60393 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NOBOXO60393 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NOBOXO60393 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NOBOXO60393 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20■□□□□ 0.79
NOBOXO60393 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NOBOXO60393 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NOBOXO60393 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20■□□□□ 0.79
NOBOXO60393 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
NOBOXO60393 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20■□□□□ 0.79
NOBOXO60393 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20■□□□□ 0.79
NOBOXO60393 AC008403.3-201ENST00000598924 454 ntBASIC20■□□□□ 0.79
NOBOXO60393 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NOBOXO60393 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
NOBOXO60393 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20■□□□□ 0.79
NOBOXO60393 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20■□□□□ 0.79
NOBOXO60393 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NOBOXO60393 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NOBOXO60393 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.99■□□□□ 0.79
NOBOXO60393 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
NOBOXO60393 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.99■□□□□ 0.79
NOBOXO60393 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms