Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD9O15198 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD9O15198 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD9O15198 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD9O15198 AC010980.2-201ENST00000587099 1412 ntBASIC18.34■□□□□ 0.53
SMAD9O15198 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD9O15198 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.34■□□□□ 0.53
SMAD9O15198 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD9O15198 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.34■□□□□ 0.53
SMAD9O15198 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD9O15198 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD9O15198 GUSBP6-202ENST00000438529 1198 ntBASIC18.34■□□□□ 0.53
SMAD9O15198 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.34■□□□□ 0.53
SMAD9O15198 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.34■□□□□ 0.53
SMAD9O15198 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.34■□□□□ 0.53
SMAD9O15198 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.34■□□□□ 0.53
SMAD9O15198 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD9O15198 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD9O15198 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD9O15198 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.34■□□□□ 0.53
SMAD9O15198 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
SMAD9O15198 CYP21A1P-202ENST00000354927 1481 ntBASIC18.33■□□□□ 0.53
SMAD9O15198 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
SMAD9O15198 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.33■□□□□ 0.53
SMAD9O15198 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
SMAD9O15198 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SMAD9O15198 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
SMAD9O15198 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
SMAD9O15198 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SMAD9O15198 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMAD9O15198 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMAD9O15198 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SMAD9O15198 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SMAD9O15198 HLA-L-209ENST00000420110 1011 ntBASIC18.33■□□□□ 0.52
SMAD9O15198 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.33■□□□□ 0.52
SMAD9O15198 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.33■□□□□ 0.52
SMAD9O15198 TSPY6P-201ENST00000448518 926 ntBASIC18.33■□□□□ 0.52
SMAD9O15198 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.33■□□□□ 0.52
SMAD9O15198 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.33■□□□□ 0.52
SMAD9O15198 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.33■□□□□ 0.52
SMAD9O15198 AC100791.3-201ENST00000617619 330 ntBASIC18.33■□□□□ 0.52
SMAD9O15198 AL109923.1-201ENST00000618799 583 ntBASIC18.33■□□□□ 0.52
SMAD9O15198 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.33■□□□□ 0.52
SMAD9O15198 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.33■□□□□ 0.52
SMAD9O15198 MKRN4P-201ENST00000444706 1521 ntBASIC18.33■□□□□ 0.52
SMAD9O15198 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.33■□□□□ 0.52
SMAD9O15198 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SMAD9O15198 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMAD9O15198 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SMAD9O15198 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SMAD9O15198 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.32■□□□□ 0.52
SMAD9O15198 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.32■□□□□ 0.52
SMAD9O15198 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMAD9O15198 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMAD9O15198 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.32■□□□□ 0.52
SMAD9O15198 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMAD9O15198 ID1-201ENST00000376105 1233 ntBASIC18.32■□□□□ 0.52
SMAD9O15198 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.32■□□□□ 0.52
SMAD9O15198 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.32■□□□□ 0.52
SMAD9O15198 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SMAD9O15198 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMAD9O15198 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.32■□□□□ 0.52
SMAD9O15198 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.32■□□□□ 0.52
SMAD9O15198 AC104771.1-201ENST00000603335 964 ntBASIC18.32■□□□□ 0.52
SMAD9O15198 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMAD9O15198 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SMAD9O15198 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SMAD9O15198 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMAD9O15198 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SMAD9O15198 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMAD9O15198 AL121603.2-201ENST00000557373 2117 ntBASIC18.32■□□□□ 0.52
SMAD9O15198 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMAD9O15198 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMAD9O15198 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.32■□□□□ 0.52
SMAD9O15198 AC027702.1-201ENST00000563810 1770 ntBASIC18.32■□□□□ 0.52
SMAD9O15198 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMAD9O15198 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMAD9O15198 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMAD9O15198 AC006128.1-201ENST00000624704 1661 ntBASIC18.31■□□□□ 0.52
SMAD9O15198 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD9O15198 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD9O15198 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD9O15198 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD9O15198 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD9O15198 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD9O15198 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD9O15198 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD9O15198 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD9O15198 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.31■□□□□ 0.52
SMAD9O15198 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SMAD9O15198 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.31■□□□□ 0.52
SMAD9O15198 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD9O15198 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD9O15198 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD9O15198 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD9O15198 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD9O15198 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.31■□□□□ 0.52
SMAD9O15198 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD9O15198 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD9O15198 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms