Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDX4O14627 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDX4O14627 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.69■□□□□ 0.74
CDX4O14627 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDX4O14627 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.69■□□□□ 0.74
CDX4O14627 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.69■□□□□ 0.74
CDX4O14627 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.69■□□□□ 0.74
CDX4O14627 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.69■□□□□ 0.74
CDX4O14627 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CDX4O14627 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.69■□□□□ 0.74
CDX4O14627 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.69■□□□□ 0.74
CDX4O14627 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDX4O14627 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDX4O14627 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
CDX4O14627 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDX4O14627 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.69■□□□□ 0.74
CDX4O14627 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDX4O14627 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.68■□□□□ 0.74
CDX4O14627 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.68■□□□□ 0.74
CDX4O14627 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
CDX4O14627 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.68■□□□□ 0.74
CDX4O14627 CR392000.1-201ENST00000624770 1228 ntBASIC19.68■□□□□ 0.74
CDX4O14627 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.68■□□□□ 0.74
CDX4O14627 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDX4O14627 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.68■□□□□ 0.74
CDX4O14627 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.68■□□□□ 0.74
CDX4O14627 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.67■□□□□ 0.74
CDX4O14627 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDX4O14627 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.67■□□□□ 0.74
CDX4O14627 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDX4O14627 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDX4O14627 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDX4O14627 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDX4O14627 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.67■□□□□ 0.74
CDX4O14627 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.67■□□□□ 0.74
CDX4O14627 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDX4O14627 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.67■□□□□ 0.74
CDX4O14627 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDX4O14627 AC010203.1-204ENST00000548782 407 ntBASIC19.67■□□□□ 0.74
CDX4O14627 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.67■□□□□ 0.74
CDX4O14627 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.67■□□□□ 0.74
CDX4O14627 AL121906.2-201ENST00000621597 723 ntBASIC19.67■□□□□ 0.74
CDX4O14627 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDX4O14627 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDX4O14627 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDX4O14627 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDX4O14627 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDX4O14627 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.67■□□□□ 0.74
CDX4O14627 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDX4O14627 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CDX4O14627 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.66■□□□□ 0.74
CDX4O14627 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDX4O14627 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDX4O14627 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDX4O14627 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.66■□□□□ 0.74
CDX4O14627 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
CDX4O14627 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.66■□□□□ 0.74
CDX4O14627 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.66■□□□□ 0.74
CDX4O14627 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.66■□□□□ 0.74
CDX4O14627 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDX4O14627 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDX4O14627 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDX4O14627 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDX4O14627 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CDX4O14627 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDX4O14627 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.66■□□□□ 0.74
CDX4O14627 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDX4O14627 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDX4O14627 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDX4O14627 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDX4O14627 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDX4O14627 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDX4O14627 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.65■□□□□ 0.74
CDX4O14627 KSR1P1-201ENST00000446298 240 ntBASIC19.65■□□□□ 0.74
CDX4O14627 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.65■□□□□ 0.74
CDX4O14627 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.65■□□□□ 0.74
CDX4O14627 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.65■□□□□ 0.74
CDX4O14627 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.65■□□□□ 0.74
CDX4O14627 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDX4O14627 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.65■□□□□ 0.74
CDX4O14627 AC006011.2-201ENST00000621313 1158 ntBASIC19.65■□□□□ 0.74
CDX4O14627 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDX4O14627 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDX4O14627 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDX4O14627 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.64■□□□□ 0.73
CDX4O14627 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDX4O14627 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.64■□□□□ 0.73
CDX4O14627 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.64■□□□□ 0.73
CDX4O14627 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CDX4O14627 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDX4O14627 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDX4O14627 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.64■□□□□ 0.73
CDX4O14627 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDX4O14627 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CDX4O14627 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.63■□□□□ 0.73
CDX4O14627 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.63■□□□□ 0.73
CDX4O14627 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CDX4O14627 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.63■□□□□ 0.73
CDX4O14627 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDX4O14627 NIFKP9-201ENST00000419265 221 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms