Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-3A0A0B4J271 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-3A0A0B4J271 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-3A0A0B4J271 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.06■□□□□ 0
TRAV12-3A0A0B4J271 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.06■□□□□ 0
TRAV12-3A0A0B4J271 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC15.05■□□□□ 0
TRAV12-3A0A0B4J271 AL512408.1-201ENST00000569378 2000 ntBASIC15.05■□□□□ 0
TRAV12-3A0A0B4J271 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV12-3A0A0B4J271 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.05■□□□□ 0
TRAV12-3A0A0B4J271 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV12-3A0A0B4J271 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV12-3A0A0B4J271 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV12-3A0A0B4J271 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV12-3A0A0B4J271 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV12-3A0A0B4J271 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV12-3A0A0B4J271 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV12-3A0A0B4J271 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV12-3A0A0B4J271 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC15.05■□□□□ -0
TRAV12-3A0A0B4J271 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC15.05■□□□□ -0
TRAV12-3A0A0B4J271 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV12-3A0A0B4J271 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV12-3A0A0B4J271 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV12-3A0A0B4J271 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV12-3A0A0B4J271 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.05■□□□□ -0
TRAV12-3A0A0B4J271 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV12-3A0A0B4J271 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV12-3A0A0B4J271 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.05■□□□□ -0
TRAV12-3A0A0B4J271 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.05■□□□□ -0
TRAV12-3A0A0B4J271 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV12-3A0A0B4J271 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV12-3A0A0B4J271 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.05■□□□□ -0
TRAV12-3A0A0B4J271 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV12-3A0A0B4J271 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRAV12-3A0A0B4J271 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV12-3A0A0B4J271 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV12-3A0A0B4J271 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 AC112907.3-201ENST00000577781 2400 ntBASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-3A0A0B4J271 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 RBM17P2-201ENST00000616397 1405 ntBASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.03■□□□□ -0
TRAV12-3A0A0B4J271 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV12-3A0A0B4J271 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV12-3A0A0B4J271 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC15.02■□□□□ -0
TRAV12-3A0A0B4J271 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV12-3A0A0B4J271 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV12-3A0A0B4J271 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms