Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TRAV4A0A0B4J268 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV4A0A0B4J268 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TRAV4A0A0B4J268 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV4A0A0B4J268 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV4A0A0B4J268 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRAV4A0A0B4J268 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV4A0A0B4J268 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV4A0A0B4J268 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TRAV4A0A0B4J268 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV4A0A0B4J268 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV4A0A0B4J268 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV4A0A0B4J268 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV4A0A0B4J268 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 AIRN-201ENST00000601203 4374 ntBASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV4A0A0B4J268 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRAV4A0A0B4J268 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 AC087623.3-201ENST00000607047 1098 ntBASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 AL020996.1-203ENST00000536896 2307 ntBASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms