Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 PRPSAP2-217ENST00000542013 1047 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
P04436 AC012038.1-201ENST00000551279 552 ntTSL 4 BASIC7.56□□□□□ -1.2
P04436 AL132855.1-201ENST00000557368 207 ntTSL 3 BASIC7.56□□□□□ -1.2
P04436 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC7.56□□□□□ -1.2
P04436 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC7.56□□□□□ -1.2
P04436 AC093826.2-201ENST00000579042 108 ntBASIC7.56□□□□□ -1.2
P04436 AC139085.1-201ENST00000582716 182 ntBASIC7.56□□□□□ -1.2
P04436 MIR3187-201ENST00000583431 70 ntBASIC7.56□□□□□ -1.2
P04436 ZNF585B-207ENST00000586320 403 ntTSL 3 BASIC7.56□□□□□ -1.2
P04436 AL356052.1-201ENST00000605764 376 ntBASIC7.56□□□□□ -1.2
P04436 AC006238.1-201ENST00000609787 534 ntBASIC7.56□□□□□ -1.2
P04436 ZSCAN26-203ENST00000611552 1030 ntTSL 2 BASIC7.56□□□□□ -1.2
P04436 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC7.56□□□□□ -1.2
P04436 RASSF3-206ENST00000637125 1060 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
P04436 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
P04436 PLEKHA5-215ENST00000539256 3357 ntTSL 2 BASIC7.56□□□□□ -1.2
P04436 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
P04436 CEACAM5-208ENST00000615021 1694 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
P04436 PAAF1-202ENST00000376384 1500 ntTSL 5 BASIC7.56□□□□□ -1.2
P04436 HNRNPA1-204ENST00000547276 1539 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
P04436 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
P04436 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
P04436 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
P04436 SEPT4-216ENST00000580844 1396 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
P04436 OR51D1-202ENST00000641817 3561 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
P04436 UBAP2L-202ENST00000343815 3411 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
P04436 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
P04436 AL359924.1-201ENST00000450451 3127 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
P04436 AC025822.2-201ENST00000455199 2287 ntTSL 2 BASIC7.55□□□□□ -1.2
P04436 ZC3H15-201ENST00000337859 2138 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
P04436 LINC00607-204ENST00000423530 2104 ntTSL 2 BASIC7.55□□□□□ -1.2
P04436 CYP4A11-203ENST00000371905 1725 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
P04436 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
P04436 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC7.55□□□□□ -1.2
P04436 AP003972.1-201ENST00000625192 5446 ntBASIC7.55□□□□□ -1.2
P04436 AC105046.1-201ENST00000566457 4997 ntBASIC7.55□□□□□ -1.2
P04436 HMGCLL1-201ENST00000274901 2475 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
P04436 PIWIL3-202ENST00000527701 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
P04436 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
P04436 GABRA1-219ENST00000638112 2818 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
P04436 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
P04436 TBX5-201ENST00000310346 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
P04436 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
P04436 RN7SKP48-201ENST00000365031 328 ntBASIC7.55□□□□□ -1.2
P04436 VTRNA1-2-201ENST00000365241 89 ntBASIC7.55□□□□□ -1.2
P04436 TRAPPC3L-202ENST00000368602 1113 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
P04436 GZMB-203ENST00000382542 666 ntTSL 2 BASIC7.55□□□□□ -1.2
P04436 MIR30C1-201ENST00000385227 89 ntBASIC7.55□□□□□ -1.2
P04436 AC096664.1-201ENST00000393996 778 ntBASIC7.55□□□□□ -1.2
P04436 BECN1P2-201ENST00000407947 812 ntBASIC7.55□□□□□ -1.2
P04436 GHRHR-204ENST00000409316 1292 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
P04436 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC7.55□□□□□ -1.2
P04436 RPL21P107-201ENST00000411449 460 ntBASIC7.55□□□□□ -1.2
P04436 AC019181.1-201ENST00000417151 310 ntBASIC7.55□□□□□ -1.2
P04436 AC008155.1-201ENST00000421078 329 ntBASIC7.55□□□□□ -1.2
P04436 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC7.55□□□□□ -1.2
P04436 TRIM43CP-201ENST00000422468 1028 ntBASIC7.55□□□□□ -1.2
P04436 AL158168.1-201ENST00000443282 357 ntTSL 3 BASIC7.55□□□□□ -1.2
P04436 LINC01432-201ENST00000449427 677 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
P04436 AC017002.3-201ENST00000455309 757 ntTSL 2 BASIC7.55□□□□□ -1.2
P04436 FTH1P4-201ENST00000480365 553 ntBASIC7.55□□□□□ -1.2
P04436 AC055758.2-202ENST00000482351 624 ntTSL 2 BASIC7.55□□□□□ -1.2
P04436 HOXB-AS1-203ENST00000504972 680 ntTSL 3 BASIC7.55□□□□□ -1.2
P04436 AC079795.1-201ENST00000508847 358 ntTSL 3 BASIC7.55□□□□□ -1.2
P04436 SCARNA20.3-201ENST00000516913 131 ntBASIC7.55□□□□□ -1.2
P04436 AP003499.1-201ENST00000527217 574 ntBASIC7.55□□□□□ -1.2
P04436 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC7.55□□□□□ -1.2
P04436 AC078950.1-204ENST00000540635 523 ntTSL 3 BASIC7.55□□□□□ -1.2
P04436 AC144548.1-201ENST00000549577 324 ntBASIC7.55□□□□□ -1.2
P04436 AC027808.2-203ENST00000558261 638 ntTSL 5 BASIC7.55□□□□□ -1.2
P04436 AC092287.1-201ENST00000565782 463 ntTSL 3 BASIC7.55□□□□□ -1.2
P04436 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC7.55□□□□□ -1.2
P04436 AL358335.3-201ENST00000604678 327 ntBASIC7.55□□□□□ -1.2
P04436 Metazoa_SRP.136-201ENST00000614846 283 ntBASIC7.55□□□□□ -1.2
P04436 MIR6737-201ENST00000617385 70 ntBASIC7.55□□□□□ -1.2
P04436 KDM5DP1-201ENST00000622542 298 ntBASIC7.55□□□□□ -1.2
P04436 MIR193BHG-210ENST00000641327 515 ntBASIC7.55□□□□□ -1.2
P04436 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.55□□□□□ -1.2
P04436 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
P04436 GLI1-201ENST00000228682 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
P04436 RBMS3-203ENST00000383767 1864 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
P04436 PSMC1-202ENST00000543772 1389 ntTSL 2 BASIC7.55□□□□□ -1.2
P04436 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
P04436 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
P04436 AC138869.3-201ENST00000563960 2486 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
P04436 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC7.55□□□□□ -1.2
P04436 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
P04436 L3MBTL3-203ENST00000368139 4148 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
P04436 CLDN16-201ENST00000264734 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
P04436 CDH13-202ENST00000428848 2195 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
P04436 AC093768.1-201ENST00000505987 2173 ntBASIC7.54□□□□□ -1.2
P04436 AL513523.1-201ENST00000417868 1309 ntBASIC7.54□□□□□ -1.2
P04436 FLT1-203ENST00000540678 1927 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
P04436 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
P04436 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
P04436 AP001528.3-201ENST00000624364 3249 ntBASIC7.54□□□□□ -1.2
P04436 LINC00410-201ENST00000419272 2018 ntTSL 2 BASIC7.54□□□□□ -1.2
P04436 KLF5-205ENST00000539231 2951 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
P04436 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
P04436 TMEM43-201ENST00000306077 3341 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms