RNA–Protein interactions for RNA: ENST00000419272.1

LINC00410-201, long intergenic non-protein coding RNA 410, humanhuman

TSL 2 BASIC

Gene LINC00410, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00410-201ENST00000419272 NISCHQ9Y2I1 1504 aa17.62■□□□□ 0.41
LINC00410-201ENST00000419272 CHIC1Q5VXU3 224 aa16.03■□□□□ 0.16
LINC00410-201ENST00000419272 AEBP2Q6ZN18 517 aaPredicted RBP15.92■□□□□ 0.14
LINC00410-201ENST00000419272 SHROOM4Q9ULL8 1493 aa15.1■□□□□ 0.01
LINC00410-201ENST00000419272 SUPT5HO00267 1087 aaKnown RBP14.99□□□□□ -0.01
LINC00410-201ENST00000419272 ZCCHC6Q5VYS8 1495 aaKnown RBP14.97□□□□□ -0.01
LINC00410-201ENST00000419272 HRCP23327 699 aa14.93□□□□□ -0.02
LINC00410-201ENST00000419272 CCDC180Q9P1Z9 1646 aa14.9□□□□□ -0.02
LINC00410-201ENST00000419272 MYO15BQ96JP2 1530 aa14.77□□□□□ -0.05
LINC00410-201ENST00000419272 PCGF6Q9BYE7 350 aa14.61□□□□□ -0.07
LINC00410-201ENST00000419272 DCAF1Q9Y4B6 1507 aa14.61□□□□□ -0.07
LINC00410-201ENST00000419272 PPARGC1BQ86YN6 1023 aaKnown RBP14.41□□□□□ -0.1
LINC00410-201ENST00000419272 DCAF8L2P0C7V8 631 aa14.37□□□□□ -0.11
LINC00410-201ENST00000419272 TRIM26Q12899 539 aaPredicted RBP14.37□□□□□ -0.11
LINC00410-201ENST00000419272 LOC105371045A0A1W2PR82 267 aa14.29□□□□□ -0.12
LINC00410-201ENST00000419272 ZEB1P37275 1124 aaPredicted RBP14.28□□□□□ -0.12
LINC00410-201ENST00000419272 PELP1Q8IZL8 1130 aaKnown RBP14.21□□□□□ -0.13
LINC00410-201ENST00000419272 ABCC9O60706 1549 aa14.2□□□□□ -0.14
LINC00410-201ENST00000419272 PHF23Q9BUL5 403 aaPredicted RBP14.16□□□□□ -0.14
LINC00410-201ENST00000419272 RSF1Q96T23 1441 aaPredicted RBP14.04□□□□□ -0.16
LINC00410-201ENST00000419272 TRIM41Q8WV44 630 aa14□□□□□ -0.17
LINC00410-201ENST00000419272 RB1CC1Q8TDY2 1594 aa13.99□□□□□ -0.17
LINC00410-201ENST00000419272 SCRIBQ14160 1630 aa13.89□□□□□ -0.19
LINC00410-201ENST00000419272 SCAF1Q9H7N4 1312 aaKnown RBP13.89□□□□□ -0.19
LINC00410-201ENST00000419272 FAM9AQ8IZU1 332 aaPredicted RBP13.8□□□□□ -0.2
LINC00410-201ENST00000419272 ACIN1Q9UKV3 1341 aaKnown RBP13.72□□□□□ -0.21
LINC00410-201ENST00000419272 NACADO15069 1562 aa13.69□□□□□ -0.22
LINC00410-201ENST00000419272 MROH2BQ7Z745 1585 aa13.67□□□□□ -0.22
LINC00410-201ENST00000419272 CCER1Q8TC90 406 aaPredicted RBP13.66□□□□□ -0.22
LINC00410-201ENST00000419272 MYT1Q01538 1121 aa13.65□□□□□ -0.22
LINC00410-201ENST00000419272 CECR2Q9BXF3 1484 aa13.65□□□□□ -0.22
LINC00410-201ENST00000419272 CENPBP07199 599 aaPredicted RBP13.64□□□□□ -0.23
LINC00410-201ENST00000419272 WRNQ14191 1432 aaPredicted RBP eCLIP13.62□□□□□ -0.23
LINC00410-201ENST00000419272 BAZ1AQ9NRL2 1556 aaPredicted RBP13.62□□□□□ -0.23
LINC00410-201ENST00000419272 EIF4G1Q04637 1599 aaKnown RBP13.61□□□□□ -0.23
LINC00410-201ENST00000419272 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.61□□□□□ -0.23
LINC00410-201ENST00000419272 WIZO95785 1651 aa13.61□□□□□ -0.23
LINC00410-201ENST00000419272 NEUROD1Q13562 356 aa13.6□□□□□ -0.23
LINC00410-201ENST00000419272 EHMT2Q96KQ7 1210 aa13.6□□□□□ -0.23
LINC00410-201ENST00000419272 DIEXFQ68CQ4 756 aaKnown RBP13.59□□□□□ -0.23
LINC00410-201ENST00000419272 GTF3C3Q9Y5Q9 886 aa13.52□□□□□ -0.25
LINC00410-201ENST00000419272 EEA1Q15075 1411 aa13.48□□□□□ -0.25
LINC00410-201ENST00000419272 TNIKQ9UKE5 1360 aa13.48□□□□□ -0.25
LINC00410-201ENST00000419272 CEP162Q5TB80 1403 aa13.48□□□□□ -0.25
LINC00410-201ENST00000419272 TOP2AP11388 1531 aaKnown RBP13.46□□□□□ -0.25
LINC00410-201ENST00000419272 ZNF316A6NFI3 1004 aaPredicted RBP13.44□□□□□ -0.26
LINC00410-201ENST00000419272 SENP3Q9H4L4 574 aaPredicted RBP13.42□□□□□ -0.26
LINC00410-201ENST00000419272 CCDC88BA6NC98 1476 aa13.42□□□□□ -0.26
LINC00410-201ENST00000419272 ABCC8Q09428 1581 aa13.39□□□□□ -0.27
LINC00410-201ENST00000419272 SMARCA2P51531 1590 aa13.37□□□□□ -0.27
LINC00410-201ENST00000419272 SMARCA4P51532 1647 aa13.35□□□□□ -0.27
LINC00410-201ENST00000419272 CSRNP3Q8WYN3 585 aa13.35□□□□□ -0.27
LINC00410-201ENST00000419272 SOGA1O94964 1423 aa13.34□□□□□ -0.27
LINC00410-201ENST00000419272 GOLGA3Q08378 1498 aa13.34□□□□□ -0.27
LINC00410-201ENST00000419272 UBTFP17480 764 aaKnown RBP13.29□□□□□ -0.28
LINC00410-201ENST00000419272 TTBK1Q5TCY1 1321 aaPredicted RBP13.27□□□□□ -0.29
LINC00410-201ENST00000419272 PLPPR3Q6T4P5 718 aa13.24□□□□□ -0.29
LINC00410-201ENST00000419272 CEP164Q9UPV0 1460 aa13.24□□□□□ -0.29
LINC00410-201ENST00000419272 KIF21BO75037 1637 aa13.23□□□□□ -0.29
LINC00410-201ENST00000419272 RUSC2Q8N2Y8 1516 aa13.23□□□□□ -0.29
LINC00410-201ENST00000419272 MIER1Q8N108 512 aa13.22□□□□□ -0.29
LINC00410-201ENST00000419272 CLSPNQ9HAW4 1339 aa13.21□□□□□ -0.3
LINC00410-201ENST00000419272 YTHDC1Q96MU7 727 aaKnown RBP13.19□□□□□ -0.3
LINC00410-201ENST00000419272 BAZ1BQ9UIG0 1483 aaKnown RBP13.18□□□□□ -0.3
LINC00410-201ENST00000419272 VPS8Q8N3P4 1428 aa13.18□□□□□ -0.3
LINC00410-201ENST00000419272 CLIP1P30622 1438 aa13.17□□□□□ -0.3
LINC00410-201ENST00000419272 HNRNPUL2Q1KMD3 747 aaKnown RBP13.14□□□□□ -0.31
LINC00410-201ENST00000419272 PEG3Q9GZU2 1588 aa13.12□□□□□ -0.31
LINC00410-201ENST00000419272 APLP2Q06481 763 aa13.12□□□□□ -0.31
LINC00410-201ENST00000419272 UNC13AQ9UPW8 1703 aa13.12□□□□□ -0.31
LINC00410-201ENST00000419272 SYNJ1O43426 1573 aa13.09□□□□□ -0.31
LINC00410-201ENST00000419272 RAPGEF2Q9Y4G8 1499 aa13.01□□□□□ -0.33
LINC00410-201ENST00000419272 DHX57Q6P158 1386 aaKnown RBP13.01□□□□□ -0.33
LINC00410-201ENST00000419272 ERICH3Q5RHP9 1530 aa12.98□□□□□ -0.33
LINC00410-201ENST00000419272 SUPT16HQ9Y5B9 1047 aaKnown RBP12.96□□□□□ -0.33
LINC00410-201ENST00000419272 TOP2BQ02880 1626 aa12.96□□□□□ -0.34
LINC00410-201ENST00000419272 BICRAQ9NZM4 1560 aa12.96□□□□□ -0.34
LINC00410-201ENST00000419272 CUX2O14529 1486 aa12.94□□□□□ -0.34
LINC00410-201ENST00000419272 RRBP1Q9P2E9 1410 aaKnown RBP12.93□□□□□ -0.34
LINC00410-201ENST00000419272 ATAD2BQ9ULI0 1458 aa12.92□□□□□ -0.34
LINC00410-201ENST00000419272 BIVM-ERCC5R4GMW8 1640 aa12.91□□□□□ -0.34
LINC00410-201ENST00000419272 ARAP1Q96P48 1450 aa12.91□□□□□ -0.34
LINC00410-201ENST00000419272 PRXQ9BXM0 1461 aa12.91□□□□□ -0.34
LINC00410-201ENST00000419272 TSHZ2Q9NRE2 1034 aa12.84□□□□□ -0.35
LINC00410-201ENST00000419272 CCNB3Q8WWL7 1395 aa12.83□□□□□ -0.36
LINC00410-201ENST00000419272 KANK4Q5T7N3 995 aaPredicted RBP12.83□□□□□ -0.36
LINC00410-201ENST00000419272 PABPN1Q86U42 306 aaKnown RBP eCLIP12.83□□□□□ -0.36
LINC00410-201ENST00000419272 RANGAP1P46060 587 aaPredicted RBP12.81□□□□□ -0.36
LINC00410-201ENST00000419272 ANP32EQ9BTT0 268 aa12.8□□□□□ -0.36
LINC00410-201ENST00000419272 KIF27Q86VH2 1401 aa12.78□□□□□ -0.36
LINC00410-201ENST00000419272 MAP3K1Q13233 1512 aa12.78□□□□□ -0.36
LINC00410-201ENST00000419272 ARHGAP35Q9NRY4 1499 aa12.74□□□□□ -0.37
LINC00410-201ENST00000419272 MAPKBP1O60336 1514 aa12.73□□□□□ -0.37
LINC00410-201ENST00000419272 TIMELESSQ9UNS1 1208 aa12.73□□□□□ -0.37
LINC00410-201ENST00000419272 RAB3GAP2Q9H2M9 1393 aa12.73□□□□□ -0.37
LINC00410-201ENST00000419272 CUX1P39880 1505 aa12.72□□□□□ -0.37
LINC00410-201ENST00000419272 SETD5Q9C0A6 1442 aa12.71□□□□□ -0.37
LINC00410-201ENST00000419272 HMGXB3Q12766 1538 aa12.69□□□□□ -0.38
LINC00410-201ENST00000419272 TIAM1Q13009 1591 aa12.69□□□□□ -0.38
LINC00410-201ENST00000419272 CCER2I3L3R5 266 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms