RNA–Protein interactions for RNA: ENST00000455309.1

AC017002.3-201, humanhuman

TSL 2 BASIC

Gene AC017002.3, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC017002.3-201ENST00000455309 AEBP2Q6ZN18 517 aaPredicted RBP23.61■■□□□ 1.37
AC017002.3-201ENST00000455309 CHIC1Q5VXU3 224 aa23.11■■□□□ 1.29
AC017002.3-201ENST00000455309 SENP3Q9H4L4 574 aaPredicted RBP20.21■□□□□ 0.83
AC017002.3-201ENST00000455309 PHF23Q9BUL5 403 aaPredicted RBP20.2■□□□□ 0.82
AC017002.3-201ENST00000455309 NISCHQ9Y2I1 1504 aa19.76■□□□□ 0.75
AC017002.3-201ENST00000455309 PLPPR3Q6T4P5 718 aa18.77■□□□□ 0.6
AC017002.3-201ENST00000455309 FOXD1Q16676 465 aa18.64■□□□□ 0.57
AC017002.3-201ENST00000455309 CCDC180Q9P1Z9 1646 aa17.88■□□□□ 0.45
AC017002.3-201ENST00000455309 PPP6R1Q9UPN7 881 aa17.8■□□□□ 0.44
AC017002.3-201ENST00000455309 ADRA2BP18089 450 aa17.78■□□□□ 0.44
AC017002.3-201ENST00000455309 ABCC9O60706 1549 aa17.77■□□□□ 0.43
AC017002.3-201ENST00000455309 PIAS4Q8N2W9 510 aaPredicted RBP17.59■□□□□ 0.41
AC017002.3-201ENST00000455309 MSH5O43196 834 aa17.37■□□□□ 0.37
AC017002.3-201ENST00000455309 RB1CC1Q8TDY2 1594 aa17■□□□□ 0.31
AC017002.3-201ENST00000455309 NACADO15069 1562 aa16.89■□□□□ 0.3
AC017002.3-201ENST00000455309 DNAJC5BQ9UF47 199 aa16.76■□□□□ 0.27
AC017002.3-201ENST00000455309 MYO15BQ96JP2 1530 aa16.75■□□□□ 0.27
AC017002.3-201ENST00000455309 UNC13AQ9UPW8 1703 aa16.62■□□□□ 0.25
AC017002.3-201ENST00000455309 BICRAQ9NZM4 1560 aa16.53■□□□□ 0.24
AC017002.3-201ENST00000455309 SCAF1Q9H7N4 1312 aaKnown RBP16.48■□□□□ 0.23
AC017002.3-201ENST00000455309 PPP4R3CPQ6ZMV5 832 aa16.46■□□□□ 0.23
AC017002.3-201ENST00000455309 SHROOM4Q9ULL8 1493 aa16.45■□□□□ 0.22
AC017002.3-201ENST00000455309 DCAF1Q9Y4B6 1507 aa16.45■□□□□ 0.22
AC017002.3-201ENST00000455309 PABPN1Q86U42 306 aaKnown RBP eCLIP16.42■□□□□ 0.22
AC017002.3-201ENST00000455309 ZCCHC6Q5VYS8 1495 aaKnown RBP16.39■□□□□ 0.21
AC017002.3-201ENST00000455309 DCAF8L2P0C7V8 631 aa16.36■□□□□ 0.21
AC017002.3-201ENST00000455309 CC2D2AQ9P2K1 1620 aa16.13■□□□□ 0.17
AC017002.3-201ENST00000455309 MAPK8IP2Q13387 824 aaPredicted RBP16.12■□□□□ 0.17
AC017002.3-201ENST00000455309 EIF4G1Q04637 1599 aaKnown RBP16.11■□□□□ 0.17
AC017002.3-201ENST00000455309 NCBP3Q53F19 620 aaKnown RBP16.1■□□□□ 0.17
AC017002.3-201ENST00000455309 SCRIBQ14160 1630 aa16.09■□□□□ 0.17
AC017002.3-201ENST00000455309 CNKSR2Q8WXI2 1034 aa16.09■□□□□ 0.17
AC017002.3-201ENST00000455309 DMRT2Q9Y5R5 561 aa16.09■□□□□ 0.17
AC017002.3-201ENST00000455309 CECR2Q9BXF3 1484 aa16.09■□□□□ 0.17
AC017002.3-201ENST00000455309 KCNA4P22459 653 aa15.93■□□□□ 0.14
AC017002.3-201ENST00000455309 POTEDQ86YR6 584 aa15.81■□□□□ 0.12
AC017002.3-201ENST00000455309 RNF216Q9NWF9 866 aaPredicted RBP15.8■□□□□ 0.12
AC017002.3-201ENST00000455309 NPM3O75607 178 aaKnown RBP15.75■□□□□ 0.11
AC017002.3-201ENST00000455309 HOXD11P31277 338 aaPredicted RBP15.75■□□□□ 0.11
AC017002.3-201ENST00000455309 NCAPD3P42695 1498 aa15.59■□□□□ 0.09
AC017002.3-201ENST00000455309 DNAJC5Q9H3Z4 198 aa15.56■□□□□ 0.08
AC017002.3-201ENST00000455309 CUX2O14529 1486 aa15.53■□□□□ 0.08
AC017002.3-201ENST00000455309 HMGXB3Q12766 1538 aa15.5■□□□□ 0.07
AC017002.3-201ENST00000455309 ATAD2BQ9ULI0 1458 aa15.47■□□□□ 0.07
AC017002.3-201ENST00000455309 SMARCA2P51531 1590 aa15.46■□□□□ 0.07
AC017002.3-201ENST00000455309 SMARCA4P51532 1647 aa15.44■□□□□ 0.06
AC017002.3-201ENST00000455309 PEG3Q9GZU2 1588 aa15.41■□□□□ 0.06
AC017002.3-201ENST00000455309 ERCC6Q03468 1493 aa15.36■□□□□ 0.05
AC017002.3-201ENST00000455309 BAZ1AQ9NRL2 1556 aaPredicted RBP15.36■□□□□ 0.05
AC017002.3-201ENST00000455309 BAZ1BQ9UIG0 1483 aaKnown RBP15.28■□□□□ 0.04
AC017002.3-201ENST00000455309 DCAF8L1A6NGE4 600 aa15.27■□□□□ 0.04
AC017002.3-201ENST00000455309 LAMC3Q9Y6N6 1575 aa15.26■□□□□ 0.03
AC017002.3-201ENST00000455309 THOC2Q8NI27 1593 aaKnown RBP15.25■□□□□ 0.03
AC017002.3-201ENST00000455309 NESP48681 1621 aa15.25■□□□□ 0.03
AC017002.3-201ENST00000455309 SLC4A1APQ9BWU0 796 aaKnown RBP15.22■□□□□ 0.03
AC017002.3-201ENST00000455309 MROH2BQ7Z745 1585 aa15.17■□□□□ 0.02
AC017002.3-201ENST00000455309 KIF21AQ7Z4S6 1674 aa15.11■□□□□ 0.01
AC017002.3-201ENST00000455309 PDS5BQ9NTI5 1447 aa15.1■□□□□ 0.01
AC017002.3-201ENST00000455309 CADPSQ9ULU8 1353 aa15.04■□□□□ -0
AC017002.3-201ENST00000455309 WDR62O43379 1518 aa15.02■□□□□ -0
AC017002.3-201ENST00000455309 MRC2Q9UBG0 1479 aa15□□□□□ -0.01
AC017002.3-201ENST00000455309 WIZO95785 1651 aa14.95□□□□□ -0.02
AC017002.3-201ENST00000455309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.93□□□□□ -0.02
AC017002.3-201ENST00000455309 CFTRP13569 1480 aa14.89□□□□□ -0.03
AC017002.3-201ENST00000455309 CEP164Q9UPV0 1460 aa14.89□□□□□ -0.03
AC017002.3-201ENST00000455309 SLC4A2P04920 1241 aa14.87□□□□□ -0.03
AC017002.3-201ENST00000455309 FANCD2Q9BXW9 1451 aa14.85□□□□□ -0.03
AC017002.3-201ENST00000455309 TOP2AP11388 1531 aaKnown RBP14.84□□□□□ -0.03
AC017002.3-201ENST00000455309 RSF1Q96T23 1441 aaPredicted RBP14.83□□□□□ -0.03
AC017002.3-201ENST00000455309 RNF39Q9H2S5 420 aa14.8□□□□□ -0.04
AC017002.3-201ENST00000455309 FOXD4L1Q9NU39 408 aa14.8□□□□□ -0.04
AC017002.3-201ENST00000455309 PRDM2Q13029 1718 aa14.78□□□□□ -0.04
AC017002.3-201ENST00000455309 URB2Q14146 1524 aaKnown RBP14.76□□□□□ -0.05
AC017002.3-201ENST00000455309 U3KPZ7 1027 aaPredicted RBP14.69□□□□□ -0.06
AC017002.3-201ENST00000455309 C1QBPQ07021 282 aaKnown RBP14.68□□□□□ -0.06
AC017002.3-201ENST00000455309 MYCNP04198 464 aaPredicted RBP14.66□□□□□ -0.06
AC017002.3-201ENST00000455309 OSCARQ8IYS5 282 aa14.64□□□□□ -0.07
AC017002.3-201ENST00000455309 IFT140Q96RY7 1462 aa14.63□□□□□ -0.07
AC017002.3-201ENST00000455309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.63□□□□□ -0.07
AC017002.3-201ENST00000455309 HNRNPUL2Q1KMD3 747 aaKnown RBP14.63□□□□□ -0.07
AC017002.3-201ENST00000455309 ZBTB22O15209 634 aa14.62□□□□□ -0.07
AC017002.3-201ENST00000455309 TRIM41Q8WV44 630 aa14.61□□□□□ -0.07
AC017002.3-201ENST00000455309 SUPT5HO00267 1087 aaKnown RBP14.6□□□□□ -0.07
AC017002.3-201ENST00000455309 ABCC8Q09428 1581 aa14.6□□□□□ -0.07
AC017002.3-201ENST00000455309 CCDC88BA6NC98 1476 aa14.59□□□□□ -0.07
AC017002.3-201ENST00000455309 TOPBP1Q92547 1522 aa14.58□□□□□ -0.08
AC017002.3-201ENST00000455309 EHMT2Q96KQ7 1210 aa14.58□□□□□ -0.08
AC017002.3-201ENST00000455309 ZNF608Q9ULD9 1512 aaPredicted RBP14.56□□□□□ -0.08
AC017002.3-201ENST00000455309 DNMBPQ6XZF7 1577 aa14.55□□□□□ -0.08
AC017002.3-201ENST00000455309 RIMBP3CA6NJZ7 1639 aa14.55□□□□□ -0.08
AC017002.3-201ENST00000455309 RIMBP3BA6NNM3 1639 aa14.55□□□□□ -0.08
AC017002.3-201ENST00000455309 RIMBP3Q9UFD9 1639 aa14.55□□□□□ -0.08
AC017002.3-201ENST00000455309 APLP2Q06481 763 aa14.54□□□□□ -0.08
AC017002.3-201ENST00000455309 SAMD1Q6SPF0 538 aaPredicted RBP14.54□□□□□ -0.08
AC017002.3-201ENST00000455309 EIF4G3O43432 1585 aaKnown RBP14.53□□□□□ -0.08
AC017002.3-201ENST00000455309 CSRNP3Q8WYN3 585 aa14.51□□□□□ -0.09
AC017002.3-201ENST00000455309 TARBP1Q13395 1621 aaKnown RBP14.51□□□□□ -0.09
AC017002.3-201ENST00000455309 ARHGEF11O15085 1522 aa14.51□□□□□ -0.09
AC017002.3-201ENST00000455309 WDR97A6NE52 1622 aa14.46□□□□□ -0.09
AC017002.3-201ENST00000455309 POLA1P09884 1462 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms