RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 PELP1Q8IZL8 1130 aaKnown RBP13.44□□□□□ -0.26
SCN8A-201ENST00000354534 DCAF8L2P0C7V8 631 aa13.18□□□□□ -0.3
SCN8A-201ENST00000354534 ERICH6Q7L0X2 663 aa13.09□□□□□ -0.31
SCN8A-201ENST00000354534 MYT1Q01538 1121 aa12.87□□□□□ -0.35
SCN8A-201ENST00000354534 CCER1Q8TC90 406 aaPredicted RBP12.82□□□□□ -0.36
SCN8A-201ENST00000354534 EHMT2Q96KQ7 1210 aa12.72□□□□□ -0.37
SCN8A-201ENST00000354534 CENPBP07199 599 aaPredicted RBP12.45□□□□□ -0.42
SCN8A-201ENST00000354534 SUPT5HO00267 1087 aaKnown RBP12.38□□□□□ -0.43
SCN8A-201ENST00000354534 YTHDC1Q96MU7 727 aaKnown RBP12.38□□□□□ -0.43
SCN8A-201ENST00000354534 TTBK1Q5TCY1 1321 aaPredicted RBP12.31□□□□□ -0.44
SCN8A-201ENST00000354534 NEFLP07196 543 aa12.3□□□□□ -0.44
SCN8A-201ENST00000354534 DAXXQ9UER7 740 aaPredicted RBP12.29□□□□□ -0.44
SCN8A-201ENST00000354534 APLP2Q06481 763 aa12.26□□□□□ -0.45
SCN8A-201ENST00000354534 PCGF6Q9BYE7 350 aa12.12□□□□□ -0.47
SCN8A-201ENST00000354534 FAM9AQ8IZU1 332 aaPredicted RBP11.99□□□□□ -0.49
SCN8A-201ENST00000354534 SHROOM4Q9ULL8 1493 aa11.98□□□□□ -0.49
SCN8A-201ENST00000354534 RANGAP1P46060 587 aaPredicted RBP11.98□□□□□ -0.49
SCN8A-201ENST00000354534 RTL5Q5HYW3 569 aaPredicted RBP11.97□□□□□ -0.49
SCN8A-201ENST00000354534 ZNF316A6NFI3 1004 aaPredicted RBP11.94□□□□□ -0.5
SCN8A-201ENST00000354534 ATP1B4Q9UN42 357 aaPredicted RBP11.91□□□□□ -0.5
SCN8A-201ENST00000354534 ZEB1P37275 1124 aaPredicted RBP11.91□□□□□ -0.5
SCN8A-201ENST00000354534 CLSPNQ9HAW4 1339 aa11.77□□□□□ -0.52
SCN8A-201ENST00000354534 CNGB1Q14028 1251 aaPredicted RBP11.72□□□□□ -0.53
SCN8A-201ENST00000354534 EIF5BO60841 1220 aaKnown RBP11.71□□□□□ -0.54
SCN8A-201ENST00000354534 POLR3GLQ9BT43 218 aa11.7□□□□□ -0.54
SCN8A-201ENST00000354534 NISCHQ9Y2I1 1504 aa11.64□□□□□ -0.55
SCN8A-201ENST00000354534 GLIPR1L2Q4G1C9 344 aa11.63□□□□□ -0.55
SCN8A-201ENST00000354534 CHIC1Q5VXU3 224 aa11.61□□□□□ -0.55
SCN8A-201ENST00000354534 SLC4A1APQ9BWU0 796 aaKnown RBP11.55□□□□□ -0.56
SCN8A-201ENST00000354534 MYT1LQ9UL68 1186 aa11.54□□□□□ -0.56
SCN8A-201ENST00000354534 PPARGC1BQ86YN6 1023 aaKnown RBP11.53□□□□□ -0.56
SCN8A-201ENST00000354534 BCL11AQ9H165 835 aa11.45□□□□□ -0.58
SCN8A-201ENST00000354534 ZBTB47Q9UFB7 747 aaPredicted RBP11.43□□□□□ -0.58
SCN8A-201ENST00000354534 ANP32BQ92688 251 aaKnown RBP11.41□□□□□ -0.58
SCN8A-201ENST00000354534 UBTFP17480 764 aaKnown RBP11.41□□□□□ -0.58
SCN8A-201ENST00000354534 CDK11AQ9UQ88 783 aaPredicted RBP11.39□□□□□ -0.59
SCN8A-201ENST00000354534 ITGAEP38570 1179 aa11.38□□□□□ -0.59
SCN8A-201ENST00000354534 BCANQ96GW7 911 aa11.38□□□□□ -0.59
SCN8A-201ENST00000354534 HRCP23327 699 aa11.33□□□□□ -0.6
SCN8A-201ENST00000354534 TRIM41Q8WV44 630 aa11.31□□□□□ -0.6
SCN8A-201ENST00000354534 SLC24A1O60721 1099 aa11.3□□□□□ -0.6
SCN8A-201ENST00000354534 ANP32AP39687 249 aaKnown RBP11.27□□□□□ -0.6
SCN8A-201ENST00000354534 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.27□□□□□ -0.61
SCN8A-201ENST00000354534 HNRNPUL2Q1KMD3 747 aaKnown RBP11.27□□□□□ -0.61
SCN8A-201ENST00000354534 NPM2Q86SE8 214 aaKnown RBP11.25□□□□□ -0.61
SCN8A-201ENST00000354534 GTF3C3Q9Y5Q9 886 aa11.22□□□□□ -0.61
SCN8A-201ENST00000354534 DIEXFQ68CQ4 756 aaKnown RBP11.21□□□□□ -0.62
SCN8A-201ENST00000354534 ARXQ96QS3 562 aa11.21□□□□□ -0.62
SCN8A-201ENST00000354534 CANXP27824 592 aaKnown RBP11.2□□□□□ -0.62
SCN8A-201ENST00000354534 HSP90AA1P07900 732 aaKnown RBP11.2□□□□□ -0.62
SCN8A-201ENST00000354534 TNNT2P45379 298 aaPredicted RBP11.19□□□□□ -0.62
SCN8A-201ENST00000354534 TRIM26Q12899 539 aaPredicted RBP11.18□□□□□ -0.62
SCN8A-201ENST00000354534 CDK11BP21127 795 aaKnown RBP11.16□□□□□ -0.62
SCN8A-201ENST00000354534 NBR1Q14596 966 aa11.13□□□□□ -0.63
SCN8A-201ENST00000354534 AMER1Q5JTC6 1135 aaPredicted RBP11.12□□□□□ -0.63
SCN8A-201ENST00000354534 UPF2Q9HAU5 1272 aaKnown RBP11.02□□□□□ -0.64
SCN8A-201ENST00000354534 ANP32CO43423 234 aa11.01□□□□□ -0.65
SCN8A-201ENST00000354534 NEFMP07197 916 aa10.99□□□□□ -0.65
SCN8A-201ENST00000354534 TRIM44Q96DX7 344 aaPredicted RBP10.99□□□□□ -0.65
SCN8A-201ENST00000354534 NEUROD1Q13562 356 aa10.94□□□□□ -0.66
SCN8A-201ENST00000354534 DNTTIP2Q5QJE6 756 aaKnown RBP10.93□□□□□ -0.66
SCN8A-201ENST00000354534 ZNF326Q5BKZ1 582 aaKnown RBP10.93□□□□□ -0.66
SCN8A-201ENST00000354534 TRIM52Q96A61 297 aa10.89□□□□□ -0.67
SCN8A-201ENST00000354534 TULP1O00294 542 aaPredicted RBP10.89□□□□□ -0.67
SCN8A-201ENST00000354534 NAP1L5Q96NT1 182 aaPredicted RBP10.88□□□□□ -0.67
SCN8A-201ENST00000354534 FAM50AQ14320 339 aaKnown RBP10.88□□□□□ -0.67
SCN8A-201ENST00000354534 FKBP8Q14318 412 aa10.85□□□□□ -0.67
SCN8A-201ENST00000354534 PTMAP06454 111 aaKnown RBP10.84□□□□□ -0.67
SCN8A-201ENST00000354534 RTN4Q9NQC3 1192 aaKnown RBP10.84□□□□□ -0.67
SCN8A-201ENST00000354534 NCBP3Q53F19 620 aaKnown RBP10.82□□□□□ -0.68
SCN8A-201ENST00000354534 NCLP19338 710 aaKnown RBP10.81□□□□□ -0.68
SCN8A-201ENST00000354534 ACIN1Q9UKV3 1341 aaKnown RBP10.79□□□□□ -0.68
SCN8A-201ENST00000354534 TPRNQ4KMQ1 711 aa10.78□□□□□ -0.68
SCN8A-201ENST00000354534 LOC105371045A0A1W2PR82 267 aa10.78□□□□□ -0.68
SCN8A-201ENST00000354534 PLPPR3Q6T4P5 718 aa10.78□□□□□ -0.68
SCN8A-201ENST00000354534 ZRSR1Q15695 479 aaKnown RBP10.77□□□□□ -0.68
SCN8A-201ENST00000354534 ERICH6BQ5W0A0 696 aa10.73□□□□□ -0.69
SCN8A-201ENST00000354534 GOLGA6L22H0YM25 854 aa10.71□□□□□ -0.69
SCN8A-201ENST00000354534 CCDC136Q96JN2 1154 aa10.71□□□□□ -0.69
SCN8A-201ENST00000354534 ANP32EQ9BTT0 268 aa10.71□□□□□ -0.69
SCN8A-201ENST00000354534 SALL2Q9Y467 1007 aaPredicted RBP10.71□□□□□ -0.69
SCN8A-201ENST00000354534 A0A0G2JS52 829 aa10.71□□□□□ -0.69
SCN8A-201ENST00000354534 TNNT3P45378 269 aaPredicted RBP10.71□□□□□ -0.7
SCN8A-201ENST00000354534 CALRP27797 417 aaKnown RBP10.7□□□□□ -0.7
SCN8A-201ENST00000354534 PLCB2Q00722 1185 aa10.7□□□□□ -0.7
SCN8A-201ENST00000354534 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.7□□□□□ -0.7
SCN8A-201ENST00000354534 BECN1Q14457 450 aa10.69□□□□□ -0.7
SCN8A-201ENST00000354534 ARID4BQ4LE39 1312 aaPredicted RBP10.68□□□□□ -0.7
SCN8A-201ENST00000354534 DDRGK1Q96HY6 314 aa10.66□□□□□ -0.7
SCN8A-201ENST00000354534 GOLGA6L6A8MZA4 724 aa10.64□□□□□ -0.71
SCN8A-201ENST00000354534 HNRNPUQ00839 825 aaKnown RBP eCLIP10.64□□□□□ -0.71
SCN8A-201ENST00000354534 CHAF1AQ13111 956 aaPredicted RBP10.64□□□□□ -0.71
SCN8A-201ENST00000354534 SCAF1Q9H7N4 1312 aaKnown RBP10.63□□□□□ -0.71
SCN8A-201ENST00000354534 PLEKHG5O94827 1062 aa10.63□□□□□ -0.71
SCN8A-201ENST00000354534 MYH16Q9H6N6 1097 aa10.63□□□□□ -0.71
SCN8A-201ENST00000354534 ARID3AQ99856 593 aa10.63□□□□□ -0.71
SCN8A-201ENST00000354534 FAM9BQ8IZU0 186 aa10.62□□□□□ -0.71
SCN8A-201ENST00000354534 TAOK2Q9UL54 1235 aa10.62□□□□□ -0.71
SCN8A-201ENST00000354534 PRM3Q9NNZ6 103 aa10.59□□□□□ -0.71
SCN8A-201ENST00000354534 MSNP26038 577 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms