Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
CYP46A1Q9Y6A2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC24.1■■□□□ 1.45
CYP46A1Q9Y6A2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CYP46A1Q9Y6A2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC24.1■■□□□ 1.45
CYP46A1Q9Y6A2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CYP46A1Q9Y6A2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CYP46A1Q9Y6A2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC24.1■■□□□ 1.45
CYP46A1Q9Y6A2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CYP46A1Q9Y6A2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
CYP46A1Q9Y6A2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CYP46A1Q9Y6A2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC24.1■■□□□ 1.45
CYP46A1Q9Y6A2 MFSD11-216ENST00000590393 1141 ntBASIC24.1■■□□□ 1.45
CYP46A1Q9Y6A2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CYP46A1Q9Y6A2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CYP46A1Q9Y6A2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CYP46A1Q9Y6A2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC24.1■■□□□ 1.45
CYP46A1Q9Y6A2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CYP46A1Q9Y6A2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CYP46A1Q9Y6A2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
CYP46A1Q9Y6A2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CYP46A1Q9Y6A2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC24.09■■□□□ 1.45
CYP46A1Q9Y6A2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC24.09■■□□□ 1.45
CYP46A1Q9Y6A2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CYP46A1Q9Y6A2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC24.09■■□□□ 1.45
CYP46A1Q9Y6A2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CYP46A1Q9Y6A2 AC016769.1-201ENST00000409132 1010 ntBASIC24.09■■□□□ 1.45
CYP46A1Q9Y6A2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC24.09■■□□□ 1.45
CYP46A1Q9Y6A2 AL162412.1-201ENST00000567129 965 ntBASIC24.09■■□□□ 1.45
CYP46A1Q9Y6A2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CYP46A1Q9Y6A2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC24.09■■□□□ 1.45
CYP46A1Q9Y6A2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC24.09■■□□□ 1.45
CYP46A1Q9Y6A2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CYP46A1Q9Y6A2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CYP46A1Q9Y6A2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CYP46A1Q9Y6A2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CYP46A1Q9Y6A2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CYP46A1Q9Y6A2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC24.08■■□□□ 1.45
CYP46A1Q9Y6A2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
CYP46A1Q9Y6A2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
CYP46A1Q9Y6A2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CYP46A1Q9Y6A2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CYP46A1Q9Y6A2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CYP46A1Q9Y6A2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.08■■□□□ 1.45
CYP46A1Q9Y6A2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
CYP46A1Q9Y6A2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC24.08■■□□□ 1.45
CYP46A1Q9Y6A2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC24.08■■□□□ 1.45
CYP46A1Q9Y6A2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.08■■□□□ 1.45
CYP46A1Q9Y6A2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.08■■□□□ 1.45
CYP46A1Q9Y6A2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CYP46A1Q9Y6A2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC24.08■■□□□ 1.45
CYP46A1Q9Y6A2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CYP46A1Q9Y6A2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC24.08■■□□□ 1.44
CYP46A1Q9Y6A2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
CYP46A1Q9Y6A2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC24.08■■□□□ 1.44
CYP46A1Q9Y6A2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CYP46A1Q9Y6A2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
CYP46A1Q9Y6A2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
CYP46A1Q9Y6A2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CYP46A1Q9Y6A2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CYP46A1Q9Y6A2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CYP46A1Q9Y6A2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
CYP46A1Q9Y6A2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CYP46A1Q9Y6A2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.07■■□□□ 1.44
CYP46A1Q9Y6A2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC24.07■■□□□ 1.44
CYP46A1Q9Y6A2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC24.07■■□□□ 1.44
CYP46A1Q9Y6A2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CYP46A1Q9Y6A2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
CYP46A1Q9Y6A2 AC016405.3-201ENST00000607710 860 ntBASIC24.07■■□□□ 1.44
CYP46A1Q9Y6A2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC24.07■■□□□ 1.44
CYP46A1Q9Y6A2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CYP46A1Q9Y6A2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CYP46A1Q9Y6A2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
CYP46A1Q9Y6A2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC24.07■■□□□ 1.44
CYP46A1Q9Y6A2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC24.07■■□□□ 1.44
CYP46A1Q9Y6A2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CYP46A1Q9Y6A2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CYP46A1Q9Y6A2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
CYP46A1Q9Y6A2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC24.07■■□□□ 1.44
CYP46A1Q9Y6A2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC24.07■■□□□ 1.44
CYP46A1Q9Y6A2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CYP46A1Q9Y6A2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CYP46A1Q9Y6A2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC24.06■■□□□ 1.44
CYP46A1Q9Y6A2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CYP46A1Q9Y6A2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
CYP46A1Q9Y6A2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC24.06■■□□□ 1.44
CYP46A1Q9Y6A2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CYP46A1Q9Y6A2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
CYP46A1Q9Y6A2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC24.06■■□□□ 1.44
CYP46A1Q9Y6A2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC24.06■■□□□ 1.44
CYP46A1Q9Y6A2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CYP46A1Q9Y6A2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.06■■□□□ 1.44
CYP46A1Q9Y6A2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CYP46A1Q9Y6A2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC24.06■■□□□ 1.44
CYP46A1Q9Y6A2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CYP46A1Q9Y6A2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC24.05■■□□□ 1.44
CYP46A1Q9Y6A2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC24.05■■□□□ 1.44
CYP46A1Q9Y6A2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC24.05■■□□□ 1.44
CYP46A1Q9Y6A2 AC087633.2-202ENST00000565166 1439 ntBASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms