Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGB1Q9Y5G3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB1Q9Y5G3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGB1Q9Y5G3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB1Q9Y5G3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB1Q9Y5G3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB1Q9Y5G3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PCDHGB1Q9Y5G3 AC009237.3-201ENST00000393279 1427 ntBASIC18.56■□□□□ 0.56
PCDHGB1Q9Y5G3 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.56■□□□□ 0.56
PCDHGB1Q9Y5G3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGB1Q9Y5G3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGB1Q9Y5G3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB1Q9Y5G3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB1Q9Y5G3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 AC135279.3-201ENST00000610945 1311 ntBASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 AC092720.2-201ENST00000602388 1665 ntBASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 MIR5787-201ENST00000611784 55 ntBASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB1Q9Y5G3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 LETM1P2-201ENST00000597330 2178 ntBASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 AC011484.1-201ENST00000377652 1995 ntBASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB1Q9Y5G3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHGB1Q9Y5G3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms