Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM5Q9Y4Y9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM5Q9Y4Y9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LSM5Q9Y4Y9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LSM5Q9Y4Y9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM5Q9Y4Y9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM5Q9Y4Y9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM5Q9Y4Y9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM5Q9Y4Y9 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM5Q9Y4Y9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LSM5Q9Y4Y9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LSM5Q9Y4Y9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM5Q9Y4Y9 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM5Q9Y4Y9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LSM5Q9Y4Y9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.72■□□□□ 0.27
LSM5Q9Y4Y9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSM5Q9Y4Y9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LSM5Q9Y4Y9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.71■□□□□ 0.27
LSM5Q9Y4Y9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
LSM5Q9Y4Y9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LSM5Q9Y4Y9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.7■□□□□ 0.26
LSM5Q9Y4Y9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSM5Q9Y4Y9 AC011484.1-201ENST00000377652 1995 ntBASIC16.69■□□□□ 0.26
LSM5Q9Y4Y9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSM5Q9Y4Y9 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSM5Q9Y4Y9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LSM5Q9Y4Y9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
LSM5Q9Y4Y9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSM5Q9Y4Y9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
LSM5Q9Y4Y9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSM5Q9Y4Y9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSM5Q9Y4Y9 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSM5Q9Y4Y9 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSM5Q9Y4Y9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
LSM5Q9Y4Y9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LSM5Q9Y4Y9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSM5Q9Y4Y9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.69■□□□□ 0.26
LSM5Q9Y4Y9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LSM5Q9Y4Y9 MIR6724-1-201ENST00000616420 92 ntBASIC16.69■□□□□ 0.26
LSM5Q9Y4Y9 MIR6724-2-201ENST00000616483 92 ntBASIC16.69■□□□□ 0.26
LSM5Q9Y4Y9 MIR6724-4-201ENST00000617390 92 ntBASIC16.69■□□□□ 0.26
LSM5Q9Y4Y9 MIR6724-3-201ENST00000622482 92 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms