Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGC3Q9UN70 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGC3Q9UN70 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHGC3Q9UN70 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGC3Q9UN70 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.48■■□□□ 1.03
PCDHGC3Q9UN70 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.48■■□□□ 1.03
PCDHGC3Q9UN70 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGC3Q9UN70 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGC3Q9UN70 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGC3Q9UN70 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PCDHGC3Q9UN70 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGC3Q9UN70 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGC3Q9UN70 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGC3Q9UN70 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGC3Q9UN70 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGC3Q9UN70 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGC3Q9UN70 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGC3Q9UN70 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PCDHGC3Q9UN70 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHGC3Q9UN70 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHGC3Q9UN70 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHGC3Q9UN70 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHGC3Q9UN70 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGC3Q9UN70 PKD1P6-201ENST00000343738 4769 ntBASIC21.47■■□□□ 1.03
PCDHGC3Q9UN70 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGC3Q9UN70 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHGC3Q9UN70 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGC3Q9UN70 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGC3Q9UN70 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
PCDHGC3Q9UN70 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHGC3Q9UN70 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHGC3Q9UN70 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.47■■□□□ 1.03
PCDHGC3Q9UN70 AL589743.5-201ENST00000616611 1050 ntBASIC21.47■■□□□ 1.03
PCDHGC3Q9UN70 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHGC3Q9UN70 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGC3Q9UN70 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHGC3Q9UN70 KRT17P1-201ENST00000399211 1546 ntBASIC21.46■■□□□ 1.03
PCDHGC3Q9UN70 MKRN4P-201ENST00000444706 1521 ntBASIC21.46■■□□□ 1.03
PCDHGC3Q9UN70 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGC3Q9UN70 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
PCDHGC3Q9UN70 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGC3Q9UN70 AC006970.2-201ENST00000450065 779 ntBASIC21.46■■□□□ 1.03
PCDHGC3Q9UN70 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHGC3Q9UN70 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.46■■□□□ 1.03
PCDHGC3Q9UN70 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGC3Q9UN70 AL121832.2-201ENST00000610979 668 ntBASIC21.46■■□□□ 1.03
PCDHGC3Q9UN70 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGC3Q9UN70 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGC3Q9UN70 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGC3Q9UN70 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
PCDHGC3Q9UN70 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGC3Q9UN70 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
PCDHGC3Q9UN70 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGC3Q9UN70 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
PCDHGC3Q9UN70 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
PCDHGC3Q9UN70 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
PCDHGC3Q9UN70 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.03
PCDHGC3Q9UN70 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.03
PCDHGC3Q9UN70 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGC3Q9UN70 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGC3Q9UN70 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGC3Q9UN70 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGC3Q9UN70 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PCDHGC3Q9UN70 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGC3Q9UN70 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGC3Q9UN70 DPP3P2-201ENST00000416030 1696 ntBASIC21.45■■□□□ 1.02
PCDHGC3Q9UN70 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.45■■□□□ 1.02
PCDHGC3Q9UN70 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.45■■□□□ 1.02
PCDHGC3Q9UN70 NCF1B-203ENST00000435988 1254 ntBASIC21.45■■□□□ 1.02
PCDHGC3Q9UN70 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGC3Q9UN70 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.45■■□□□ 1.02
PCDHGC3Q9UN70 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGC3Q9UN70 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGC3Q9UN70 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHGC3Q9UN70 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHGC3Q9UN70 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGC3Q9UN70 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGC3Q9UN70 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGC3Q9UN70 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGC3Q9UN70 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHGC3Q9UN70 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGC3Q9UN70 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGC3Q9UN70 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGC3Q9UN70 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
PCDHGC3Q9UN70 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
PCDHGC3Q9UN70 AC083906.2-201ENST00000511578 360 ntBASIC21.44■■□□□ 1.02
PCDHGC3Q9UN70 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDHGC3Q9UN70 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.44■■□□□ 1.02
PCDHGC3Q9UN70 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PCDHGC3Q9UN70 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGC3Q9UN70 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHGC3Q9UN70 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
PCDHGC3Q9UN70 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGC3Q9UN70 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGC3Q9UN70 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGC3Q9UN70 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHGC3Q9UN70 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.43■■□□□ 1.02
PCDHGC3Q9UN70 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHGC3Q9UN70 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHGC3Q9UN70 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms