Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CPSF2Q9P2I0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
CPSF2Q9P2I0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CPSF2Q9P2I0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CPSF2Q9P2I0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.39■□□□□ 0.85
CPSF2Q9P2I0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPSF2Q9P2I0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.39■□□□□ 0.85
CPSF2Q9P2I0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPSF2Q9P2I0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPSF2Q9P2I0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CPSF2Q9P2I0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CPSF2Q9P2I0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CPSF2Q9P2I0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CPSF2Q9P2I0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPSF2Q9P2I0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPSF2Q9P2I0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPSF2Q9P2I0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.38■□□□□ 0.85
CPSF2Q9P2I0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.38■□□□□ 0.85
CPSF2Q9P2I0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CPSF2Q9P2I0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.38■□□□□ 0.85
CPSF2Q9P2I0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CPSF2Q9P2I0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.38■□□□□ 0.85
CPSF2Q9P2I0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPSF2Q9P2I0 AL512408.1-201ENST00000569378 2000 ntBASIC20.38■□□□□ 0.85
CPSF2Q9P2I0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CPSF2Q9P2I0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.38■□□□□ 0.85
CPSF2Q9P2I0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPSF2Q9P2I0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPSF2Q9P2I0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CPSF2Q9P2I0 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.38■□□□□ 0.85
CPSF2Q9P2I0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.38■□□□□ 0.85
CPSF2Q9P2I0 AL358852.1-201ENST00000623174 1268 ntBASIC20.38■□□□□ 0.85
CPSF2Q9P2I0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.38■□□□□ 0.85
CPSF2Q9P2I0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.38■□□□□ 0.85
CPSF2Q9P2I0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.38■□□□□ 0.85
CPSF2Q9P2I0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPSF2Q9P2I0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CPSF2Q9P2I0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.37■□□□□ 0.85
CPSF2Q9P2I0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPSF2Q9P2I0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPSF2Q9P2I0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPSF2Q9P2I0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPSF2Q9P2I0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPSF2Q9P2I0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPSF2Q9P2I0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.37■□□□□ 0.85
CPSF2Q9P2I0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.37■□□□□ 0.85
CPSF2Q9P2I0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPSF2Q9P2I0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.37■□□□□ 0.85
CPSF2Q9P2I0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPSF2Q9P2I0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.37■□□□□ 0.85
CPSF2Q9P2I0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPSF2Q9P2I0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPSF2Q9P2I0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPSF2Q9P2I0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CPSF2Q9P2I0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.37■□□□□ 0.85
CPSF2Q9P2I0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPSF2Q9P2I0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPSF2Q9P2I0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.37■□□□□ 0.85
CPSF2Q9P2I0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPSF2Q9P2I0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPSF2Q9P2I0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CPSF2Q9P2I0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.36■□□□□ 0.85
CPSF2Q9P2I0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPSF2Q9P2I0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.36■□□□□ 0.85
CPSF2Q9P2I0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPSF2Q9P2I0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.36■□□□□ 0.85
CPSF2Q9P2I0 AC079140.4-201ENST00000507448 529 ntBASIC20.36■□□□□ 0.85
CPSF2Q9P2I0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.36■□□□□ 0.85
CPSF2Q9P2I0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.36■□□□□ 0.85
CPSF2Q9P2I0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPSF2Q9P2I0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.36■□□□□ 0.85
CPSF2Q9P2I0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPSF2Q9P2I0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CPSF2Q9P2I0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPSF2Q9P2I0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPSF2Q9P2I0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CPSF2Q9P2I0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CPSF2Q9P2I0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
CPSF2Q9P2I0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CPSF2Q9P2I0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPSF2Q9P2I0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPSF2Q9P2I0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CPSF2Q9P2I0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPSF2Q9P2I0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPSF2Q9P2I0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CPSF2Q9P2I0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CPSF2Q9P2I0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.34■□□□□ 0.85
CPSF2Q9P2I0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CPSF2Q9P2I0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
CPSF2Q9P2I0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.34■□□□□ 0.85
CPSF2Q9P2I0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.34■□□□□ 0.85
CPSF2Q9P2I0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CPSF2Q9P2I0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPSF2Q9P2I0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CPSF2Q9P2I0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPSF2Q9P2I0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPSF2Q9P2I0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPSF2Q9P2I0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.34■□□□□ 0.85
CPSF2Q9P2I0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPSF2Q9P2I0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms