Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
SND1-IT1Q9HBX3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC13.58□□□□□ -0.24
SND1-IT1Q9HBX3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SND1-IT1Q9HBX3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SND1-IT1Q9HBX3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SND1-IT1Q9HBX3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
SND1-IT1Q9HBX3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SND1-IT1Q9HBX3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
SND1-IT1Q9HBX3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC13.58□□□□□ -0.24
SND1-IT1Q9HBX3 DUX4L19-201ENST00000557448 1267 ntBASIC13.58□□□□□ -0.24
SND1-IT1Q9HBX3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SND1-IT1Q9HBX3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC13.58□□□□□ -0.24
SND1-IT1Q9HBX3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC13.58□□□□□ -0.24
SND1-IT1Q9HBX3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC13.58□□□□□ -0.24
SND1-IT1Q9HBX3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SND1-IT1Q9HBX3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC13.58□□□□□ -0.24
SND1-IT1Q9HBX3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SND1-IT1Q9HBX3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SND1-IT1Q9HBX3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC13.58□□□□□ -0.24
SND1-IT1Q9HBX3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SND1-IT1Q9HBX3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SND1-IT1Q9HBX3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SND1-IT1Q9HBX3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SND1-IT1Q9HBX3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 AL512631.2-201ENST00000604634 923 ntBASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 AC011298.3-201ENST00000615796 283 ntBASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SND1-IT1Q9HBX3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms