Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AL512408.1-201ENST00000569378 2000 ntBASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 AC009102.2-201ENST00000606772 1639 ntBASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
LCE3DQ9BYE3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 FP700111.2-201ENST00000619190 1892 ntBASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 AP000974.1-201ENST00000623909 2387 ntBASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LCE3DQ9BYE3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms