Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 MCM22YJR135C 720 nt1.11□□□□□ -2.23
ATG40Q99325 TIF11YMR260C 462 nt1.11□□□□□ -2.23
ATG40Q99325 IPP1YBR011C 864 nt1.11□□□□□ -2.23
ATG40Q99325 YPL039WYPL039W 951 nt1.11□□□□□ -2.23
ATG40Q99325 YCL002CYCL002C 792 nt1.11□□□□□ -2.23
ATG40Q99325 AHC1YOR023C 1701 nt1.11□□□□□ -2.23
ATG40Q99325 DAS1YJL149W 1992 nt1.1□□□□□ -2.23
ATG40Q99325 GUP1YGL084C 1683 nt1.1□□□□□ -2.23
ATG40Q99325 SKI3YPR189W 4299 nt1.1□□□□□ -2.23
ATG40Q99325 YLR307C-AYLR307C-A 264 nt1.1□□□□□ -2.23
ATG40Q99325 PET123YOR158W 957 nt1.1□□□□□ -2.23
ATG40Q99325 YBR224WYBR224W 516 nt1.1□□□□□ -2.23
ATG40Q99325 GPX2YBR244W 489 nt1.1□□□□□ -2.23
ATG40Q99325 MSH3YCR092C 3057 nt1.1□□□□□ -2.23
ATG40Q99325 YSW1YBR148W 1830 nt1.1□□□□□ -2.23
ATG40Q99325 SEY1YOR165W 2331 nt1.09□□□□□ -2.23
ATG40Q99325 IRC19YLL033W 693 nt1.09□□□□□ -2.23
ATG40Q99325 SEC22YLR268W 645 nt1.09□□□□□ -2.23
ATG40Q99325 YMR013C-AYMR013C-A 150 nt1.09□□□□□ -2.23
ATG40Q99325 YMR254CYMR254C 309 nt1.09□□□□□ -2.23
ATG40Q99325 MNL2YLR057W 2550 nt1.09□□□□□ -2.24
ATG40Q99325 MSC6YOR354C 2079 nt1.09□□□□□ -2.24
ATG40Q99325 HMI1YOL095C 2121 nt1.09□□□□□ -2.24
ATG40Q99325 SEC21YNL287W 2808 nt1.08□□□□□ -2.24
ATG40Q99325 DOT6YER088C 2013 nt1.08□□□□□ -2.24
ATG40Q99325 TUS1YLR425W 3924 nt1.08□□□□□ -2.24
ATG40Q99325 YDL068WYDL068W 330 nt1.08□□□□□ -2.24
ATG40Q99325 CDC36YDL165W 576 nt1.08□□□□□ -2.24
ATG40Q99325 MND1YGL183C 660 nt1.08□□□□□ -2.24
ATG40Q99325 BMT5YIL096C 1011 nt1.08□□□□□ -2.24
ATG40Q99325 CMS1YLR003C 876 nt1.08□□□□□ -2.24
ATG40Q99325 LCL2YLR104W 396 nt1.08□□□□□ -2.24
ATG40Q99325 GRX5YPL059W 453 nt1.08□□□□□ -2.24
ATG40Q99325 YLR149CYLR149C 2193 nt1.08□□□□□ -2.24
ATG40Q99325 NOP53YPL146C 1368 nt1.08□□□□□ -2.24
ATG40Q99325 YGR250CYGR250C 2346 nt1.07□□□□□ -2.24
ATG40Q99325 RVS161YCR009C 798 nt1.07□□□□□ -2.24
ATG40Q99325 YCR043CYCR043C 384 nt1.07□□□□□ -2.24
ATG40Q99325 YCR102W-AYCR102W-A 198 nt1.07□□□□□ -2.24
ATG40Q99325 YGR228WYGR228W 345 nt1.07□□□□□ -2.24
ATG40Q99325 YHR054CYHR054C 1065 nt1.07□□□□□ -2.24
ATG40Q99325 YHR214W-AYHR214W-A 486 nt1.07□□□□□ -2.24
ATG40Q99325 YIL020C-AYIL020C-A 339 nt1.07□□□□□ -2.24
ATG40Q99325 RPL37AYLR185W 267 nt1.07□□□□□ -2.24
ATG40Q99325 YAR068WYAR068W 486 nt1.07□□□□□ -2.24
ATG40Q99325 PGA1YNL158W 597 nt1.07□□□□□ -2.24
ATG40Q99325 RPL33BYOR234C 324 nt1.07□□□□□ -2.24
ATG40Q99325 IRE1YHR079C 3348 nt1.07□□□□□ -2.24
ATG40Q99325 MDM32YOR147W 1869 nt1.06□□□□□ -2.24
ATG40Q99325 snR83snR83 306 nt1.06□□□□□ -2.24
ATG40Q99325 YER088C-AYER088C-A 324 nt1.06□□□□□ -2.24
ATG40Q99325 SPO11YHL022C 1197 nt1.06□□□□□ -2.24
ATG40Q99325 SEC28YIL076W 891 nt1.06□□□□□ -2.24
ATG40Q99325 YNL050CYNL050C 813 nt1.06□□□□□ -2.24
ATG40Q99325 YNL146C-AYNL146C-A 195 nt1.06□□□□□ -2.24
ATG40Q99325 YNL226WYNL226W 411 nt1.06□□□□□ -2.24
ATG40Q99325 RPB11YOL005C 363 nt1.06□□□□□ -2.24
ATG40Q99325 ATP20YPR020W 348 nt1.06□□□□□ -2.24
ATG40Q99325 COX1Q0045 1605 nt1.06□□□□□ -2.24
ATG40Q99325 YBR012W-AYBR012W-A 1323 nt1.06□□□□□ -2.24
ATG40Q99325 YOR142W-AYOR142W-A 1323 nt1.06□□□□□ -2.24
ATG40Q99325 YPR158W-AYPR158W-A 1323 nt1.06□□□□□ -2.24
ATG40Q99325 CTF4YPR135W 2784 nt1.06□□□□□ -2.24
ATG40Q99325 MSH5YDL154W 2706 nt1.05□□□□□ -2.24
ATG40Q99325 snR9snR9 187 nt1.05□□□□□ -2.24
ATG40Q99325 CIC1YHR052W 1131 nt1.05□□□□□ -2.24
ATG40Q99325 YJL047C-AYJL047C-A 135 nt1.05□□□□□ -2.24
ATG40Q99325 RPC25YKL144C 639 nt1.05□□□□□ -2.24
ATG40Q99325 YPR096CYPR096C 303 nt1.05□□□□□ -2.24
ATG40Q99325 KAR3YPR141C 2190 nt1.05□□□□□ -2.24
ATG40Q99325 BST1YFL025C 3090 nt1.04□□□□□ -2.24
ATG40Q99325 PEP3YLR148W 2757 nt1.04□□□□□ -2.24
ATG40Q99325 YFL012W-AYFL012W-A 375 nt1.04□□□□□ -2.24
ATG40Q99325 YJL022WYJL022W 309 nt1.04□□□□□ -2.24
ATG40Q99325 YLR140WYLR140W 327 nt1.04□□□□□ -2.24
ATG40Q99325 YOL159CYOL159C 516 nt1.04□□□□□ -2.24
ATG40Q99325 YFL002W-BYFL002W-B 1317 nt1.04□□□□□ -2.24
ATG40Q99325 YGR161W-AYGR161W-A 1317 nt1.04□□□□□ -2.24
ATG40Q99325 YBL100W-AYBL100W-A 1317 nt1.04□□□□□ -2.24
ATG40Q99325 YCL020WYCL020W 1317 nt1.04□□□□□ -2.24
ATG40Q99325 SWT1YOR166C 1377 nt1.04□□□□□ -2.24
ATG40Q99325 SMC4YLR086W 4257 nt1.04□□□□□ -2.24
ATG40Q99325 SGD1YLR336C 2700 nt1.03□□□□□ -2.24
ATG40Q99325 RLM1YPL089C 2031 nt1.03□□□□□ -2.24
ATG40Q99325 LRP1YHR081W 555 nt1.03□□□□□ -2.24
ATG40Q99325 RPL34BYIL052C 366 nt1.03□□□□□ -2.24
ATG40Q99325 NOP15YNL110C 663 nt1.03□□□□□ -2.24
ATG40Q99325 IRR1YIL026C 3453 nt1.03□□□□□ -2.24
ATG40Q99325 BI4Q0120 1917 nt1.03□□□□□ -2.25
ATG40Q99325 CTR9YOL145C 3234 nt1.02□□□□□ -2.25
ATG40Q99325 VAM6YDL077C 3150 nt1.02□□□□□ -2.25
ATG40Q99325 YDR220CYDR220C 294 nt1.02□□□□□ -2.25
ATG40Q99325 VPS52YDR484W 1926 nt1.02□□□□□ -2.25
ATG40Q99325 ALK1YGL021W 2283 nt1.02□□□□□ -2.25
ATG40Q99325 YJR140W-AYJR140W-A 150 nt1.02□□□□□ -2.25
ATG40Q99325 CGI121YML036W 546 nt1.02□□□□□ -2.25
ATG40Q99325 COX7YMR256C 183 nt1.02□□□□□ -2.25
ATG40Q99325 KAP122YGL016W 3246 nt1.02□□□□□ -2.25
ATG40Q99325 YNL284C-BYNL284C-B 5268 nt1.02□□□□□ -2.25
ATG40Q99325 REF2YDR195W 1602 nt1.01□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 23.8 ms