Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BBS4Q96RK4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BBS4Q96RK4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BBS4Q96RK4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BBS4Q96RK4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.23■□□□□ 0.67
BBS4Q96RK4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BBS4Q96RK4 AC006015.1-201ENST00000429970 570 ntBASIC19.23■□□□□ 0.67
BBS4Q96RK4 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.23■□□□□ 0.67
BBS4Q96RK4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.23■□□□□ 0.67
BBS4Q96RK4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.23■□□□□ 0.67
BBS4Q96RK4 AC007322.4-201ENST00000509611 723 ntBASIC19.23■□□□□ 0.67
BBS4Q96RK4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.23■□□□□ 0.67
BBS4Q96RK4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BBS4Q96RK4 AC011767.1-201ENST00000617410 1153 ntBASIC19.23■□□□□ 0.67
BBS4Q96RK4 BID-214ENST00000617586 542 ntTSL 5 BASIC19.23■□□□□ 0.67
BBS4Q96RK4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
BBS4Q96RK4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.23■□□□□ 0.67
BBS4Q96RK4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
BBS4Q96RK4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BBS4Q96RK4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.23■□□□□ 0.67
BBS4Q96RK4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BBS4Q96RK4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BBS4Q96RK4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
BBS4Q96RK4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
BBS4Q96RK4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BBS4Q96RK4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BBS4Q96RK4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.22■□□□□ 0.67
BBS4Q96RK4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
BBS4Q96RK4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.22■□□□□ 0.67
BBS4Q96RK4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.22■□□□□ 0.67
BBS4Q96RK4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.22■□□□□ 0.67
BBS4Q96RK4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BBS4Q96RK4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
BBS4Q96RK4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.22■□□□□ 0.67
BBS4Q96RK4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.22■□□□□ 0.67
BBS4Q96RK4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BBS4Q96RK4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.21■□□□□ 0.67
BBS4Q96RK4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BBS4Q96RK4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BBS4Q96RK4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BBS4Q96RK4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
BBS4Q96RK4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BBS4Q96RK4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.21■□□□□ 0.67
BBS4Q96RK4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BBS4Q96RK4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.21■□□□□ 0.67
BBS4Q96RK4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.21■□□□□ 0.67
BBS4Q96RK4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BBS4Q96RK4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BBS4Q96RK4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.21■□□□□ 0.67
BBS4Q96RK4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BBS4Q96RK4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BBS4Q96RK4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BBS4Q96RK4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BBS4Q96RK4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BBS4Q96RK4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.2■□□□□ 0.66
BBS4Q96RK4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BBS4Q96RK4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
BBS4Q96RK4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BBS4Q96RK4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
BBS4Q96RK4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
BBS4Q96RK4 DUX4L16-201ENST00000555130 1264 ntBASIC19.2■□□□□ 0.66
BBS4Q96RK4 AL162412.1-201ENST00000567129 965 ntBASIC19.2■□□□□ 0.66
BBS4Q96RK4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.2■□□□□ 0.66
BBS4Q96RK4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.2■□□□□ 0.66
BBS4Q96RK4 AC022517.1-201ENST00000592429 346 ntBASIC19.2■□□□□ 0.66
BBS4Q96RK4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BBS4Q96RK4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.2■□□□□ 0.66
BBS4Q96RK4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.2■□□□□ 0.66
BBS4Q96RK4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BBS4Q96RK4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
BBS4Q96RK4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
BBS4Q96RK4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.19■□□□□ 0.66
BBS4Q96RK4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BBS4Q96RK4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.19■□□□□ 0.66
BBS4Q96RK4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.19■□□□□ 0.66
BBS4Q96RK4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
BBS4Q96RK4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.19■□□□□ 0.66
BBS4Q96RK4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BBS4Q96RK4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BBS4Q96RK4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BBS4Q96RK4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
BBS4Q96RK4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
BBS4Q96RK4 PGM5P4-201ENST00000421970 445 ntBASIC19.19■□□□□ 0.66
BBS4Q96RK4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.19■□□□□ 0.66
BBS4Q96RK4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.19■□□□□ 0.66
BBS4Q96RK4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
BBS4Q96RK4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BBS4Q96RK4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BBS4Q96RK4 AC073130.3-201ENST00000624389 2278 ntBASIC19.19■□□□□ 0.66
BBS4Q96RK4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BBS4Q96RK4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BBS4Q96RK4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
BBS4Q96RK4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BBS4Q96RK4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
BBS4Q96RK4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BBS4Q96RK4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BBS4Q96RK4 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.19■□□□□ 0.66
BBS4Q96RK4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BBS4Q96RK4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.18■□□□□ 0.66
BBS4Q96RK4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms