Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 AC099791.2-201ENST00000605725 427 ntBASIC15.31■□□□□ 0.04
AP1S3Q96PC3 AC092171.4-201ENST00000609130 632 ntBASIC15.31■□□□□ 0.04
AP1S3Q96PC3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
AP1S3Q96PC3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S3Q96PC3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S3Q96PC3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
AP1S3Q96PC3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S3Q96PC3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
AP1S3Q96PC3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S3Q96PC3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S3Q96PC3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.3■□□□□ 0.04
AP1S3Q96PC3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S3Q96PC3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S3Q96PC3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC15.3■□□□□ 0.04
AP1S3Q96PC3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.3■□□□□ 0.04
AP1S3Q96PC3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC15.3■□□□□ 0.04
AP1S3Q96PC3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S3Q96PC3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S3Q96PC3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S3Q96PC3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S3Q96PC3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
AP1S3Q96PC3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
AP1S3Q96PC3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S3Q96PC3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC15.29■□□□□ 0.04
AP1S3Q96PC3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
AP1S3Q96PC3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S3Q96PC3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S3Q96PC3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
AP1S3Q96PC3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC15.29■□□□□ 0.04
AP1S3Q96PC3 AP004607.7-201ENST00000527152 1677 ntBASIC15.29■□□□□ 0.04
AP1S3Q96PC3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
AP1S3Q96PC3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S3Q96PC3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC15.29■□□□□ 0.04
AP1S3Q96PC3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.29■□□□□ 0.04
AP1S3Q96PC3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC15.29■□□□□ 0.04
AP1S3Q96PC3 MIR3181-201ENST00000578512 73 ntBASIC15.29■□□□□ 0.04
AP1S3Q96PC3 FLJ16779-201ENST00000612722 7638 ntBASIC15.29■□□□□ 0.04
AP1S3Q96PC3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S3Q96PC3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S3Q96PC3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S3Q96PC3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
AP1S3Q96PC3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.29■□□□□ 0.04
AP1S3Q96PC3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
AP1S3Q96PC3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S3Q96PC3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
AP1S3Q96PC3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.29■□□□□ 0.04
AP1S3Q96PC3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
AP1S3Q96PC3 AC003102.1-202ENST00000563394 1796 ntBASIC15.29■□□□□ 0.04
AP1S3Q96PC3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S3Q96PC3 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
AP1S3Q96PC3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S3Q96PC3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S3Q96PC3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S3Q96PC3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S3Q96PC3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S3Q96PC3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S3Q96PC3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S3Q96PC3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S3Q96PC3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
AP1S3Q96PC3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms