Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
LRCH3Q96II8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
LRCH3Q96II8 AC007322.3-201ENST00000426526 701 ntBASIC22.09■■□□□ 1.13
LRCH3Q96II8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.09■■□□□ 1.13
LRCH3Q96II8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.09■■□□□ 1.13
LRCH3Q96II8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC22.09■■□□□ 1.13
LRCH3Q96II8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.09■■□□□ 1.13
LRCH3Q96II8 AC093458.2-201ENST00000623150 629 ntBASIC22.09■■□□□ 1.13
LRCH3Q96II8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC22.09■■□□□ 1.13
LRCH3Q96II8 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRCH3Q96II8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
LRCH3Q96II8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.09■■□□□ 1.13
LRCH3Q96II8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
LRCH3Q96II8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRCH3Q96II8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRCH3Q96II8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRCH3Q96II8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.09■■□□□ 1.13
LRCH3Q96II8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRCH3Q96II8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
LRCH3Q96II8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
LRCH3Q96II8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
LRCH3Q96II8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
LRCH3Q96II8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LRCH3Q96II8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
LRCH3Q96II8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LRCH3Q96II8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.08■■□□□ 1.13
LRCH3Q96II8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.08■■□□□ 1.13
LRCH3Q96II8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LRCH3Q96II8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LRCH3Q96II8 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
LRCH3Q96II8 AP000347.1-202ENST00000435868 847 ntBASIC22.08■■□□□ 1.13
LRCH3Q96II8 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC22.08■■□□□ 1.13
LRCH3Q96II8 LINC01238-205ENST00000567549 1107 ntBASIC22.08■■□□□ 1.13
LRCH3Q96II8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
LRCH3Q96II8 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.08■■□□□ 1.12
LRCH3Q96II8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.12
LRCH3Q96II8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
LRCH3Q96II8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
LRCH3Q96II8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LRCH3Q96II8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
LRCH3Q96II8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
LRCH3Q96II8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.07■■□□□ 1.12
LRCH3Q96II8 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LRCH3Q96II8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LRCH3Q96II8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC22.07■■□□□ 1.12
LRCH3Q96II8 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LRCH3Q96II8 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
LRCH3Q96II8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC22.07■■□□□ 1.12
LRCH3Q96II8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC22.07■■□□□ 1.12
LRCH3Q96II8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.07■■□□□ 1.12
LRCH3Q96II8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC22.07■■□□□ 1.12
LRCH3Q96II8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LRCH3Q96II8 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LRCH3Q96II8 CLEC4GP1-201ENST00000596555 870 ntBASIC22.07■■□□□ 1.12
LRCH3Q96II8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC22.07■■□□□ 1.12
LRCH3Q96II8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.07■■□□□ 1.12
LRCH3Q96II8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.07■■□□□ 1.12
LRCH3Q96II8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
LRCH3Q96II8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRCH3Q96II8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRCH3Q96II8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
LRCH3Q96II8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRCH3Q96II8 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRCH3Q96II8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.06■■□□□ 1.12
LRCH3Q96II8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
LRCH3Q96II8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
LRCH3Q96II8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.06■■□□□ 1.12
LRCH3Q96II8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
LRCH3Q96II8 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRCH3Q96II8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC22.06■■□□□ 1.12
LRCH3Q96II8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC22.06■■□□□ 1.12
LRCH3Q96II8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC22.06■■□□□ 1.12
LRCH3Q96II8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC22.06■■□□□ 1.12
LRCH3Q96II8 AC006538.3-201ENST00000612495 578 ntBASIC22.06■■□□□ 1.12
LRCH3Q96II8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC22.06■■□□□ 1.12
LRCH3Q96II8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
LRCH3Q96II8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.06■■□□□ 1.12
LRCH3Q96II8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.06■■□□□ 1.12
LRCH3Q96II8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LRCH3Q96II8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
LRCH3Q96II8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRCH3Q96II8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LRCH3Q96II8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRCH3Q96II8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.05■■□□□ 1.12
LRCH3Q96II8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRCH3Q96II8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRCH3Q96II8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC22.05■■□□□ 1.12
LRCH3Q96II8 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.05■■□□□ 1.12
LRCH3Q96II8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
LRCH3Q96II8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.05■■□□□ 1.12
LRCH3Q96II8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRCH3Q96II8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
LRCH3Q96II8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRCH3Q96II8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRCH3Q96II8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
LRCH3Q96II8 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
LRCH3Q96II8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.04■■□□□ 1.12
LRCH3Q96II8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC22.04■■□□□ 1.12
LRCH3Q96II8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
LRCH3Q96II8 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms