Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TIMD4Q96H15 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TIMD4Q96H15 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
TIMD4Q96H15 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TIMD4Q96H15 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.07■□□□□ 0.32
TIMD4Q96H15 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMD4Q96H15 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMD4Q96H15 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMD4Q96H15 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.06■□□□□ 0.32
TIMD4Q96H15 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TIMD4Q96H15 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TIMD4Q96H15 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TIMD4Q96H15 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMD4Q96H15 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TIMD4Q96H15 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TIMD4Q96H15 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.06■□□□□ 0.32
TIMD4Q96H15 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TIMD4Q96H15 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMD4Q96H15 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TIMD4Q96H15 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMD4Q96H15 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMD4Q96H15 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMD4Q96H15 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMD4Q96H15 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TIMD4Q96H15 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.06■□□□□ 0.32
TIMD4Q96H15 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.06■□□□□ 0.32
TIMD4Q96H15 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.06■□□□□ 0.32
TIMD4Q96H15 AC026366.1-201ENST00000488803 879 ntBASIC17.06■□□□□ 0.32
TIMD4Q96H15 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.06■□□□□ 0.32
TIMD4Q96H15 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.06■□□□□ 0.32
TIMD4Q96H15 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TIMD4Q96H15 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TIMD4Q96H15 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.06■□□□□ 0.32
TIMD4Q96H15 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMD4Q96H15 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TIMD4Q96H15 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.06■□□□□ 0.32
TIMD4Q96H15 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TIMD4Q96H15 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TIMD4Q96H15 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMD4Q96H15 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMD4Q96H15 AC138932.1-201ENST00000534164 6830 ntBASIC17.05■□□□□ 0.32
TIMD4Q96H15 AC027702.1-201ENST00000563810 1770 ntBASIC17.05■□□□□ 0.32
TIMD4Q96H15 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMD4Q96H15 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMD4Q96H15 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMD4Q96H15 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMD4Q96H15 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.05■□□□□ 0.32
TIMD4Q96H15 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMD4Q96H15 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMD4Q96H15 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.05■□□□□ 0.32
TIMD4Q96H15 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TIMD4Q96H15 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMD4Q96H15 AL390719.1-204ENST00000412397 1219 ntBASIC17.05■□□□□ 0.32
TIMD4Q96H15 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TIMD4Q96H15 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMD4Q96H15 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.05■□□□□ 0.32
TIMD4Q96H15 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMD4Q96H15 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.05■□□□□ 0.32
TIMD4Q96H15 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.05■□□□□ 0.32
TIMD4Q96H15 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.05■□□□□ 0.32
TIMD4Q96H15 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.05■□□□□ 0.32
TIMD4Q96H15 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMD4Q96H15 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMD4Q96H15 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMD4Q96H15 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
TIMD4Q96H15 AC079834.2-201ENST00000609776 1949 ntBASIC17.05■□□□□ 0.32
TIMD4Q96H15 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMD4Q96H15 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMD4Q96H15 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.05■□□□□ 0.32
TIMD4Q96H15 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMD4Q96H15 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TIMD4Q96H15 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TIMD4Q96H15 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TIMD4Q96H15 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TIMD4Q96H15 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TIMD4Q96H15 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TIMD4Q96H15 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.04■□□□□ 0.32
TIMD4Q96H15 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.04■□□□□ 0.32
TIMD4Q96H15 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.04■□□□□ 0.32
TIMD4Q96H15 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.04■□□□□ 0.32
TIMD4Q96H15 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TIMD4Q96H15 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
TIMD4Q96H15 AC006058.3-201ENST00000606217 1069 ntBASIC17.04■□□□□ 0.32
TIMD4Q96H15 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.04■□□□□ 0.32
TIMD4Q96H15 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
TIMD4Q96H15 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TIMD4Q96H15 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TIMD4Q96H15 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TIMD4Q96H15 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
TIMD4Q96H15 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.04■□□□□ 0.32
TIMD4Q96H15 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TIMD4Q96H15 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TIMD4Q96H15 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TIMD4Q96H15 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.04■□□□□ 0.32
TIMD4Q96H15 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TIMD4Q96H15 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TIMD4Q96H15 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TIMD4Q96H15 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TIMD4Q96H15 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TIMD4Q96H15 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms