Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF31Q96EP0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF31Q96EP0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF31Q96EP0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF31Q96EP0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF31Q96EP0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF31Q96EP0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF31Q96EP0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF31Q96EP0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF31Q96EP0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RNF31Q96EP0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF31Q96EP0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RNF31Q96EP0 GCSHP5-201ENST00000443090 522 ntBASIC19.55■□□□□ 0.72
RNF31Q96EP0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF31Q96EP0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF31Q96EP0 AC026366.1-201ENST00000488803 879 ntBASIC19.55■□□□□ 0.72
RNF31Q96EP0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.55■□□□□ 0.72
RNF31Q96EP0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.55■□□□□ 0.72
RNF31Q96EP0 AC008403.3-201ENST00000598924 454 ntBASIC19.55■□□□□ 0.72
RNF31Q96EP0 AL589743.5-201ENST00000616611 1050 ntBASIC19.55■□□□□ 0.72
RNF31Q96EP0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF31Q96EP0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RNF31Q96EP0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RNF31Q96EP0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF31Q96EP0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
RNF31Q96EP0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RNF31Q96EP0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.55■□□□□ 0.72
RNF31Q96EP0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RNF31Q96EP0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF31Q96EP0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RNF31Q96EP0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RNF31Q96EP0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF31Q96EP0 AC092368.3-202ENST00000574180 1591 ntBASIC19.54■□□□□ 0.72
RNF31Q96EP0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF31Q96EP0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF31Q96EP0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF31Q96EP0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF31Q96EP0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF31Q96EP0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF31Q96EP0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF31Q96EP0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF31Q96EP0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.54■□□□□ 0.72
RNF31Q96EP0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF31Q96EP0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.54■□□□□ 0.72
RNF31Q96EP0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF31Q96EP0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF31Q96EP0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.54■□□□□ 0.72
RNF31Q96EP0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF31Q96EP0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF31Q96EP0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF31Q96EP0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF31Q96EP0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF31Q96EP0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RNF31Q96EP0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF31Q96EP0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF31Q96EP0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF31Q96EP0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF31Q96EP0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF31Q96EP0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF31Q96EP0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF31Q96EP0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF31Q96EP0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF31Q96EP0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RNF31Q96EP0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RNF31Q96EP0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.53■□□□□ 0.72
RNF31Q96EP0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.53■□□□□ 0.72
RNF31Q96EP0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF31Q96EP0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF31Q96EP0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF31Q96EP0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF31Q96EP0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RNF31Q96EP0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF31Q96EP0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF31Q96EP0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF31Q96EP0 AC116050.2-201ENST00000612102 1779 ntBASIC19.52■□□□□ 0.72
RNF31Q96EP0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF31Q96EP0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF31Q96EP0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF31Q96EP0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF31Q96EP0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF31Q96EP0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RNF31Q96EP0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF31Q96EP0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF31Q96EP0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
RNF31Q96EP0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF31Q96EP0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RNF31Q96EP0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF31Q96EP0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF31Q96EP0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF31Q96EP0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
RNF31Q96EP0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF31Q96EP0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF31Q96EP0 SOX15-203ENST00000570788 1093 ntBASIC19.52■□□□□ 0.72
RNF31Q96EP0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF31Q96EP0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF31Q96EP0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RNF31Q96EP0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RNF31Q96EP0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RNF31Q96EP0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF31Q96EP0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms