Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC44A1Q8WWI5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC44A1Q8WWI5 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC44A1Q8WWI5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC44A1Q8WWI5 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.34■□□□□ 0.85
SLC44A1Q8WWI5 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SLC44A1Q8WWI5 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SLC44A1Q8WWI5 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC44A1Q8WWI5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
SLC44A1Q8WWI5 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC44A1Q8WWI5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SLC44A1Q8WWI5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC44A1Q8WWI5 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC44A1Q8WWI5 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.34■□□□□ 0.85
SLC44A1Q8WWI5 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SLC44A1Q8WWI5 AP001160.3-201ENST00000601484 763 ntBASIC20.34■□□□□ 0.85
SLC44A1Q8WWI5 AC104187.1-201ENST00000607510 612 ntBASIC20.34■□□□□ 0.85
SLC44A1Q8WWI5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SLC44A1Q8WWI5 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC44A1Q8WWI5 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC44A1Q8WWI5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC44A1Q8WWI5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC44A1Q8WWI5 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC44A1Q8WWI5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SLC44A1Q8WWI5 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SLC44A1Q8WWI5 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC44A1Q8WWI5 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC44A1Q8WWI5 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC44A1Q8WWI5 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.33■□□□□ 0.85
SLC44A1Q8WWI5 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SLC44A1Q8WWI5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC44A1Q8WWI5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.33■□□□□ 0.85
SLC44A1Q8WWI5 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC44A1Q8WWI5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC44A1Q8WWI5 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC44A1Q8WWI5 DPP3P2-201ENST00000416030 1696 ntBASIC20.33■□□□□ 0.85
SLC44A1Q8WWI5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC44A1Q8WWI5 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC44A1Q8WWI5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC44A1Q8WWI5 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC44A1Q8WWI5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SLC44A1Q8WWI5 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC44A1Q8WWI5 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC44A1Q8WWI5 AC027612.3-201ENST00000413684 1047 ntBASIC20.33■□□□□ 0.85
SLC44A1Q8WWI5 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC44A1Q8WWI5 AC091799.1-201ENST00000422823 811 ntBASIC20.33■□□□□ 0.85
SLC44A1Q8WWI5 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC44A1Q8WWI5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SLC44A1Q8WWI5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SLC44A1Q8WWI5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.33■□□□□ 0.84
SLC44A1Q8WWI5 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
SLC44A1Q8WWI5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC44A1Q8WWI5 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC44A1Q8WWI5 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
SLC44A1Q8WWI5 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.33■□□□□ 0.84
SLC44A1Q8WWI5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC44A1Q8WWI5 AL691432.2-201ENST00000607222 2038 ntBASIC20.32■□□□□ 0.84
SLC44A1Q8WWI5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SLC44A1Q8WWI5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC44A1Q8WWI5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC44A1Q8WWI5 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC44A1Q8WWI5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC44A1Q8WWI5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC44A1Q8WWI5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC44A1Q8WWI5 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC44A1Q8WWI5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC44A1Q8WWI5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.32■□□□□ 0.84
SLC44A1Q8WWI5 CCDC92B-201ENST00000575506 885 ntBASIC20.32■□□□□ 0.84
SLC44A1Q8WWI5 AC243732.1-201ENST00000612648 864 ntBASIC20.32■□□□□ 0.84
SLC44A1Q8WWI5 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SLC44A1Q8WWI5 AC087289.5-201ENST00000586076 3175 ntBASIC20.32■□□□□ 0.84
SLC44A1Q8WWI5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC44A1Q8WWI5 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC44A1Q8WWI5 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SLC44A1Q8WWI5 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC44A1Q8WWI5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC44A1Q8WWI5 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC44A1Q8WWI5 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC44A1Q8WWI5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC44A1Q8WWI5 TMEM179-206ENST00000616017 1645 ntBASIC20.31■□□□□ 0.84
SLC44A1Q8WWI5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SLC44A1Q8WWI5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SLC44A1Q8WWI5 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SLC44A1Q8WWI5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC44A1Q8WWI5 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC44A1Q8WWI5 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SLC44A1Q8WWI5 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC44A1Q8WWI5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.31■□□□□ 0.84
SLC44A1Q8WWI5 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.31■□□□□ 0.84
SLC44A1Q8WWI5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.31■□□□□ 0.84
SLC44A1Q8WWI5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SLC44A1Q8WWI5 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC44A1Q8WWI5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SLC44A1Q8WWI5 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC44A1Q8WWI5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC44A1Q8WWI5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC44A1Q8WWI5 RNF165-205ENST00000588679 2904 ntBASIC20.3■□□□□ 0.84
SLC44A1Q8WWI5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SLC44A1Q8WWI5 BX119927.1-201ENST00000636596 1552 ntBASIC20.3■□□□□ 0.84
SLC44A1Q8WWI5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms