Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SNED1Q8TER0 AL390719.1-204ENST00000412397 1219 ntBASIC24.93■■□□□ 1.58
SNED1Q8TER0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC24.93■■□□□ 1.58
SNED1Q8TER0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC24.93■■□□□ 1.58
SNED1Q8TER0 AC092865.7-201ENST00000641832 219 ntBASIC24.93■■□□□ 1.58
SNED1Q8TER0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC24.93■■□□□ 1.58
SNED1Q8TER0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC24.93■■□□□ 1.58
SNED1Q8TER0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SNED1Q8TER0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SNED1Q8TER0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC24.92■■□□□ 1.58
SNED1Q8TER0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SNED1Q8TER0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC24.92■■□□□ 1.58
SNED1Q8TER0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC24.92■■□□□ 1.58
SNED1Q8TER0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SNED1Q8TER0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SNED1Q8TER0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
SNED1Q8TER0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SNED1Q8TER0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SNED1Q8TER0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
SNED1Q8TER0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SNED1Q8TER0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SNED1Q8TER0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
SNED1Q8TER0 AC079598.2-202ENST00000546624 1451 ntBASIC24.91■■□□□ 1.58
SNED1Q8TER0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SNED1Q8TER0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SNED1Q8TER0 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SNED1Q8TER0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC24.91■■□□□ 1.58
SNED1Q8TER0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.91■■□□□ 1.58
SNED1Q8TER0 RBM17P1-201ENST00000453646 1190 ntBASIC24.91■■□□□ 1.58
SNED1Q8TER0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC24.91■■□□□ 1.58
SNED1Q8TER0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC24.91■■□□□ 1.58
SNED1Q8TER0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
SNED1Q8TER0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
SNED1Q8TER0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
SNED1Q8TER0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SNED1Q8TER0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SNED1Q8TER0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
SNED1Q8TER0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SNED1Q8TER0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
SNED1Q8TER0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SNED1Q8TER0 AC124283.5-201ENST00000624661 1809 ntBASIC24.9■■□□□ 1.58
SNED1Q8TER0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
SNED1Q8TER0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
SNED1Q8TER0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SNED1Q8TER0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC24.9■■□□□ 1.58
SNED1Q8TER0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SNED1Q8TER0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
SNED1Q8TER0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC24.9■■□□□ 1.58
SNED1Q8TER0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SNED1Q8TER0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SNED1Q8TER0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
SNED1Q8TER0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
SNED1Q8TER0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
SNED1Q8TER0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC24.89■■□□□ 1.58
SNED1Q8TER0 AL353807.1-201ENST00000427475 662 ntBASIC24.89■■□□□ 1.58
SNED1Q8TER0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SNED1Q8TER0 NUDT16P1-203ENST00000513809 620 ntBASIC24.89■■□□□ 1.58
SNED1Q8TER0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SNED1Q8TER0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SNED1Q8TER0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC24.89■■□□□ 1.57
SNED1Q8TER0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC24.89■■□□□ 1.57
SNED1Q8TER0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC24.89■■□□□ 1.57
SNED1Q8TER0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
SNED1Q8TER0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC24.89■■□□□ 1.57
SNED1Q8TER0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
SNED1Q8TER0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
SNED1Q8TER0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SNED1Q8TER0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
SNED1Q8TER0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SNED1Q8TER0 FAM197Y1-201ENST00000421178 764 ntBASIC24.88■■□□□ 1.57
SNED1Q8TER0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC24.88■■□□□ 1.57
SNED1Q8TER0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC24.88■■□□□ 1.57
SNED1Q8TER0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC24.88■■□□□ 1.57
SNED1Q8TER0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
SNED1Q8TER0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC24.88■■□□□ 1.57
SNED1Q8TER0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC24.88■■□□□ 1.57
SNED1Q8TER0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SNED1Q8TER0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SNED1Q8TER0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SNED1Q8TER0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SNED1Q8TER0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SNED1Q8TER0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC24.87■■□□□ 1.57
SNED1Q8TER0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC24.87■■□□□ 1.57
SNED1Q8TER0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SNED1Q8TER0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
SNED1Q8TER0 REXO1L10P-201ENST00000615707 1290 ntBASIC24.87■■□□□ 1.57
SNED1Q8TER0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC24.87■■□□□ 1.57
SNED1Q8TER0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC24.87■■□□□ 1.57
SNED1Q8TER0 ECEL1P1-201ENST00000373592 1742 ntBASIC24.87■■□□□ 1.57
SNED1Q8TER0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC24.87■■□□□ 1.57
SNED1Q8TER0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SNED1Q8TER0 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.87■■□□□ 1.57
SNED1Q8TER0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC24.87■■□□□ 1.57
SNED1Q8TER0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SNED1Q8TER0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
SNED1Q8TER0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC24.86■■□□□ 1.57
SNED1Q8TER0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC24.86■■□□□ 1.57
SNED1Q8TER0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC24.86■■□□□ 1.57
SNED1Q8TER0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC24.86■■□□□ 1.57
SNED1Q8TER0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC24.86■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms