Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DNAAF1Q8NEP3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
DNAAF1Q8NEP3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DNAAF1Q8NEP3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
DNAAF1Q8NEP3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
DNAAF1Q8NEP3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DNAAF1Q8NEP3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
DNAAF1Q8NEP3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
DNAAF1Q8NEP3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.82■□□□□ 0.44
DNAAF1Q8NEP3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.82■□□□□ 0.44
DNAAF1Q8NEP3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DNAAF1Q8NEP3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
DNAAF1Q8NEP3 AC061975.6-201ENST00000579045 1553 ntBASIC17.82■□□□□ 0.44
DNAAF1Q8NEP3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DNAAF1Q8NEP3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
DNAAF1Q8NEP3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
DNAAF1Q8NEP3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DNAAF1Q8NEP3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DNAAF1Q8NEP3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DNAAF1Q8NEP3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 POU5F1P4-201ENST00000413175 1085 ntBASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNAAF1Q8NEP3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.8■□□□□ 0.44
DNAAF1Q8NEP3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
DNAAF1Q8NEP3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DNAAF1Q8NEP3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.8■□□□□ 0.44
DNAAF1Q8NEP3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DNAAF1Q8NEP3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
DNAAF1Q8NEP3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.8■□□□□ 0.44
DNAAF1Q8NEP3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
DNAAF1Q8NEP3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
DNAAF1Q8NEP3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
DNAAF1Q8NEP3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DNAAF1Q8NEP3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
DNAAF1Q8NEP3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.8■□□□□ 0.44
DNAAF1Q8NEP3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
DNAAF1Q8NEP3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.8■□□□□ 0.44
DNAAF1Q8NEP3 AC008175.2-201ENST00000612840 297 ntBASIC17.8■□□□□ 0.44
DNAAF1Q8NEP3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
DNAAF1Q8NEP3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DNAAF1Q8NEP3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DNAAF1Q8NEP3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 IRS3P-201ENST00000223076 1006 ntBASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 AC079140.4-201ENST00000507448 529 ntBASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 KRT87P-202ENST00000534226 1464 ntBASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.79■□□□□ 0.44
DNAAF1Q8NEP3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
DNAAF1Q8NEP3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
DNAAF1Q8NEP3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DNAAF1Q8NEP3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
DNAAF1Q8NEP3 TCF3P1-201ENST00000423021 1937 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms