Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC28.49■■■□□ 2.15
XRN1Q8IZH2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC28.49■■■□□ 2.15
XRN1Q8IZH2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC28.49■■■□□ 2.15
XRN1Q8IZH2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
XRN1Q8IZH2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
XRN1Q8IZH2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
XRN1Q8IZH2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
XRN1Q8IZH2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
XRN1Q8IZH2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC28.49■■■□□ 2.15
XRN1Q8IZH2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
XRN1Q8IZH2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC28.49■■■□□ 2.15
XRN1Q8IZH2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
XRN1Q8IZH2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC28.49■■■□□ 2.15
XRN1Q8IZH2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
XRN1Q8IZH2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
XRN1Q8IZH2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
XRN1Q8IZH2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
XRN1Q8IZH2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
XRN1Q8IZH2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
XRN1Q8IZH2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC28.48■■■□□ 2.15
XRN1Q8IZH2 NIFKP9-201ENST00000419265 221 ntBASIC28.48■■■□□ 2.15
XRN1Q8IZH2 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
XRN1Q8IZH2 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC28.48■■■□□ 2.15
XRN1Q8IZH2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
XRN1Q8IZH2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
XRN1Q8IZH2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC28.47■■■□□ 2.15
XRN1Q8IZH2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
XRN1Q8IZH2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
XRN1Q8IZH2 F2R-202ENST00000505600 442 ntTSL 2 BASIC28.47■■■□□ 2.15
XRN1Q8IZH2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC28.47■■■□□ 2.15
XRN1Q8IZH2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC28.47■■■□□ 2.15
XRN1Q8IZH2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
XRN1Q8IZH2 AC010947.1-201ENST00000623454 693 ntBASIC28.47■■■□□ 2.15
XRN1Q8IZH2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC28.47■■■□□ 2.15
XRN1Q8IZH2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC28.47■■■□□ 2.15
XRN1Q8IZH2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC28.47■■■□□ 2.15
XRN1Q8IZH2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC28.47■■■□□ 2.15
XRN1Q8IZH2 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC28.46■■■□□ 2.15
XRN1Q8IZH2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC28.46■■■□□ 2.15
XRN1Q8IZH2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
XRN1Q8IZH2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
XRN1Q8IZH2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC28.46■■■□□ 2.15
XRN1Q8IZH2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC28.46■■■□□ 2.15
XRN1Q8IZH2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
XRN1Q8IZH2 CYP2D8P-201ENST00000433633 1490 ntBASIC28.46■■■□□ 2.15
XRN1Q8IZH2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
XRN1Q8IZH2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
XRN1Q8IZH2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
XRN1Q8IZH2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
XRN1Q8IZH2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
XRN1Q8IZH2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
XRN1Q8IZH2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
XRN1Q8IZH2 AC116562.2-201ENST00000507042 360 ntBASIC28.46■■■□□ 2.15
XRN1Q8IZH2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC28.46■■■□□ 2.15
XRN1Q8IZH2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC28.46■■■□□ 2.15
XRN1Q8IZH2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
XRN1Q8IZH2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
XRN1Q8IZH2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
XRN1Q8IZH2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC28.45■■■□□ 2.15
XRN1Q8IZH2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.14
XRN1Q8IZH2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
XRN1Q8IZH2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
XRN1Q8IZH2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC28.45■■■□□ 2.14
XRN1Q8IZH2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
XRN1Q8IZH2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
XRN1Q8IZH2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
XRN1Q8IZH2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
XRN1Q8IZH2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
XRN1Q8IZH2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC28.44■■■□□ 2.14
XRN1Q8IZH2 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC28.44■■■□□ 2.14
XRN1Q8IZH2 AC005363.2-201ENST00000618631 242 ntBASIC28.44■■■□□ 2.14
XRN1Q8IZH2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
XRN1Q8IZH2 ARMC10P1-201ENST00000313754 855 ntBASIC28.43■■■□□ 2.14
XRN1Q8IZH2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC28.43■■■□□ 2.14
XRN1Q8IZH2 MIR1238-201ENST00000408483 83 ntBASIC28.43■■■□□ 2.14
XRN1Q8IZH2 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC28.43■■■□□ 2.14
XRN1Q8IZH2 AL590326.2-201ENST00000625139 305 ntBASIC28.43■■■□□ 2.14
XRN1Q8IZH2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
XRN1Q8IZH2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
XRN1Q8IZH2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC28.43■■■□□ 2.14
XRN1Q8IZH2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC28.43■■■□□ 2.14
XRN1Q8IZH2 LINC01568-207ENST00000641790 1380 ntBASIC28.43■■■□□ 2.14
XRN1Q8IZH2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC28.43■■■□□ 2.14
XRN1Q8IZH2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
XRN1Q8IZH2 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
XRN1Q8IZH2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC28.42■■■□□ 2.14
XRN1Q8IZH2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC28.42■■■□□ 2.14
XRN1Q8IZH2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
XRN1Q8IZH2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
XRN1Q8IZH2 FITM1-202ENST00000559294 800 ntBASIC28.42■■■□□ 2.14
XRN1Q8IZH2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC28.42■■■□□ 2.14
XRN1Q8IZH2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
XRN1Q8IZH2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
XRN1Q8IZH2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC28.42■■■□□ 2.14
XRN1Q8IZH2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
XRN1Q8IZH2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
XRN1Q8IZH2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
XRN1Q8IZH2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
XRN1Q8IZH2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
XRN1Q8IZH2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC28.41■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms