Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCN4BQ8IWT1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SCN4BQ8IWT1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCN4BQ8IWT1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SCN4BQ8IWT1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.45■■□□□ 1.02
SCN4BQ8IWT1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SCN4BQ8IWT1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.45■■□□□ 1.02
SCN4BQ8IWT1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SCN4BQ8IWT1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCN4BQ8IWT1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCN4BQ8IWT1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SCN4BQ8IWT1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
SCN4BQ8IWT1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCN4BQ8IWT1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
SCN4BQ8IWT1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SCN4BQ8IWT1 PRORSD1P-201ENST00000295112 541 ntBASIC21.44■■□□□ 1.02
SCN4BQ8IWT1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.44■■□□□ 1.02
SCN4BQ8IWT1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.44■■□□□ 1.02
SCN4BQ8IWT1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.44■■□□□ 1.02
SCN4BQ8IWT1 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.44■■□□□ 1.02
SCN4BQ8IWT1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SCN4BQ8IWT1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCN4BQ8IWT1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.44■■□□□ 1.02
SCN4BQ8IWT1 SOX15-203ENST00000570788 1093 ntBASIC21.44■■□□□ 1.02
SCN4BQ8IWT1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.44■■□□□ 1.02
SCN4BQ8IWT1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SCN4BQ8IWT1 AC008687.6-201ENST00000596318 630 ntBASIC21.44■■□□□ 1.02
SCN4BQ8IWT1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCN4BQ8IWT1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCN4BQ8IWT1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCN4BQ8IWT1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCN4BQ8IWT1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SCN4BQ8IWT1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCN4BQ8IWT1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SCN4BQ8IWT1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.44■■□□□ 1.02
SCN4BQ8IWT1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.44■■□□□ 1.02
SCN4BQ8IWT1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCN4BQ8IWT1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SCN4BQ8IWT1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.43■■□□□ 1.02
SCN4BQ8IWT1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SCN4BQ8IWT1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCN4BQ8IWT1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SCN4BQ8IWT1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.43■■□□□ 1.02
SCN4BQ8IWT1 AC128676.1-201ENST00000454392 318 ntBASIC21.43■■□□□ 1.02
SCN4BQ8IWT1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
SCN4BQ8IWT1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.43■■□□□ 1.02
SCN4BQ8IWT1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SCN4BQ8IWT1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCN4BQ8IWT1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SCN4BQ8IWT1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SCN4BQ8IWT1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SCN4BQ8IWT1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SCN4BQ8IWT1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.43■■□□□ 1.02
SCN4BQ8IWT1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCN4BQ8IWT1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.43■■□□□ 1.02
SCN4BQ8IWT1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCN4BQ8IWT1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SCN4BQ8IWT1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.42■■□□□ 1.02
SCN4BQ8IWT1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
SCN4BQ8IWT1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SCN4BQ8IWT1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SCN4BQ8IWT1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SCN4BQ8IWT1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SCN4BQ8IWT1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
SCN4BQ8IWT1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.42■■□□□ 1.02
SCN4BQ8IWT1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.42■■□□□ 1.02
SCN4BQ8IWT1 KRT8P36-201ENST00000489121 1440 ntBASIC21.42■■□□□ 1.02
SCN4BQ8IWT1 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.42■■□□□ 1.02
SCN4BQ8IWT1 UNC93B4-201ENST00000505679 747 ntBASIC21.42■■□□□ 1.02
SCN4BQ8IWT1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SCN4BQ8IWT1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.42■■□□□ 1.02
SCN4BQ8IWT1 AC008403.3-201ENST00000598924 454 ntBASIC21.42■■□□□ 1.02
SCN4BQ8IWT1 AC005229.4-201ENST00000610085 2198 ntBASIC21.41■■□□□ 1.02
SCN4BQ8IWT1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.41■■□□□ 1.02
SCN4BQ8IWT1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCN4BQ8IWT1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCN4BQ8IWT1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
SCN4BQ8IWT1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
SCN4BQ8IWT1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.41■■□□□ 1.02
SCN4BQ8IWT1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SCN4BQ8IWT1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCN4BQ8IWT1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.41■■□□□ 1.02
SCN4BQ8IWT1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.41■■□□□ 1.02
SCN4BQ8IWT1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.41■■□□□ 1.02
SCN4BQ8IWT1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.41■■□□□ 1.02
SCN4BQ8IWT1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SCN4BQ8IWT1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.41■■□□□ 1.02
SCN4BQ8IWT1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCN4BQ8IWT1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCN4BQ8IWT1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SCN4BQ8IWT1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCN4BQ8IWT1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
SCN4BQ8IWT1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.4■■□□□ 1.02
SCN4BQ8IWT1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCN4BQ8IWT1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.4■■□□□ 1.02
SCN4BQ8IWT1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.4■■□□□ 1.02
SCN4BQ8IWT1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.4■■□□□ 1.02
SCN4BQ8IWT1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCN4BQ8IWT1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SCN4BQ8IWT1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms