Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
CROCCP2Q86T23 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
CROCCP2Q86T23 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CROCCP2Q86T23 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CROCCP2Q86T23 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CROCCP2Q86T23 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.6■□□□□ 0.89
CROCCP2Q86T23 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.6■□□□□ 0.89
CROCCP2Q86T23 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CROCCP2Q86T23 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CROCCP2Q86T23 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CROCCP2Q86T23 AC133561.4-201ENST00000566112 224 ntBASIC20.6■□□□□ 0.89
CROCCP2Q86T23 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.6■□□□□ 0.89
CROCCP2Q86T23 AC053503.5-201ENST00000601508 636 ntBASIC20.6■□□□□ 0.89
CROCCP2Q86T23 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CROCCP2Q86T23 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CROCCP2Q86T23 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CROCCP2Q86T23 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CROCCP2Q86T23 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CROCCP2Q86T23 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CROCCP2Q86T23 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.59■□□□□ 0.89
CROCCP2Q86T23 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.59■□□□□ 0.89
CROCCP2Q86T23 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CROCCP2Q86T23 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CROCCP2Q86T23 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CROCCP2Q86T23 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CROCCP2Q86T23 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CROCCP2Q86T23 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CROCCP2Q86T23 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CROCCP2Q86T23 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CROCCP2Q86T23 AC009299.2-201ENST00000482477 511 ntBASIC20.59■□□□□ 0.89
CROCCP2Q86T23 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.59■□□□□ 0.89
CROCCP2Q86T23 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.59■□□□□ 0.89
CROCCP2Q86T23 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.59■□□□□ 0.89
CROCCP2Q86T23 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.59■□□□□ 0.89
CROCCP2Q86T23 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CROCCP2Q86T23 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CROCCP2Q86T23 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CROCCP2Q86T23 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CROCCP2Q86T23 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CROCCP2Q86T23 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CROCCP2Q86T23 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.59■□□□□ 0.89
CROCCP2Q86T23 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CROCCP2Q86T23 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CROCCP2Q86T23 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.89
CROCCP2Q86T23 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CROCCP2Q86T23 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CROCCP2Q86T23 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.58■□□□□ 0.89
CROCCP2Q86T23 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CROCCP2Q86T23 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CROCCP2Q86T23 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CROCCP2Q86T23 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CROCCP2Q86T23 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.58■□□□□ 0.89
CROCCP2Q86T23 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.58■□□□□ 0.89
CROCCP2Q86T23 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CROCCP2Q86T23 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.58■□□□□ 0.89
CROCCP2Q86T23 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.58■□□□□ 0.89
CROCCP2Q86T23 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CROCCP2Q86T23 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CROCCP2Q86T23 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.58■□□□□ 0.88
CROCCP2Q86T23 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CROCCP2Q86T23 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CROCCP2Q86T23 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.58■□□□□ 0.88
CROCCP2Q86T23 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CROCCP2Q86T23 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
CROCCP2Q86T23 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CROCCP2Q86T23 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CROCCP2Q86T23 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CROCCP2Q86T23 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CROCCP2Q86T23 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CROCCP2Q86T23 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CROCCP2Q86T23 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CROCCP2Q86T23 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
CROCCP2Q86T23 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CROCCP2Q86T23 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CROCCP2Q86T23 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.57■□□□□ 0.88
CROCCP2Q86T23 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CROCCP2Q86T23 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.57■□□□□ 0.88
CROCCP2Q86T23 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.57■□□□□ 0.88
CROCCP2Q86T23 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CROCCP2Q86T23 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
CROCCP2Q86T23 AIRN-201ENST00000601203 4374 ntBASIC20.57■□□□□ 0.88
CROCCP2Q86T23 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CROCCP2Q86T23 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CROCCP2Q86T23 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.57■□□□□ 0.88
CROCCP2Q86T23 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.57■□□□□ 0.88
CROCCP2Q86T23 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CROCCP2Q86T23 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CROCCP2Q86T23 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CROCCP2Q86T23 AC004408.2-201ENST00000623613 2777 ntBASIC20.57■□□□□ 0.88
CROCCP2Q86T23 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.56■□□□□ 0.88
CROCCP2Q86T23 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.56■□□□□ 0.88
CROCCP2Q86T23 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CROCCP2Q86T23 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.56■□□□□ 0.88
CROCCP2Q86T23 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CROCCP2Q86T23 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CROCCP2Q86T23 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CROCCP2Q86T23 EEF1DP3-203ENST00000566025 782 ntBASIC20.56■□□□□ 0.88
CROCCP2Q86T23 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CROCCP2Q86T23 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.56■□□□□ 0.88
CROCCP2Q86T23 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms