Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTL6Q6ICC9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RTL6Q6ICC9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL6Q6ICC9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
RTL6Q6ICC9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RTL6Q6ICC9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL6Q6ICC9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL6Q6ICC9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.32■□□□□ 0.52
RTL6Q6ICC9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
RTL6Q6ICC9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RTL6Q6ICC9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RTL6Q6ICC9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.32■□□□□ 0.52
RTL6Q6ICC9 AC092368.3-202ENST00000574180 1591 ntBASIC18.32■□□□□ 0.52
RTL6Q6ICC9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
RTL6Q6ICC9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL6Q6ICC9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.32■□□□□ 0.52
RTL6Q6ICC9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
RTL6Q6ICC9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.32■□□□□ 0.52
RTL6Q6ICC9 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL6Q6ICC9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL6Q6ICC9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RTL6Q6ICC9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL6Q6ICC9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.31■□□□□ 0.52
RTL6Q6ICC9 UNC93B4-201ENST00000505679 747 ntBASIC18.31■□□□□ 0.52
RTL6Q6ICC9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL6Q6ICC9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTL6Q6ICC9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTL6Q6ICC9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTL6Q6ICC9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RTL6Q6ICC9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.3■□□□□ 0.52
RTL6Q6ICC9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RTL6Q6ICC9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTL6Q6ICC9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTL6Q6ICC9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RTL6Q6ICC9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.3■□□□□ 0.52
RTL6Q6ICC9 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.3■□□□□ 0.52
RTL6Q6ICC9 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.3■□□□□ 0.52
RTL6Q6ICC9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.3■□□□□ 0.52
RTL6Q6ICC9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.3■□□□□ 0.52
RTL6Q6ICC9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTL6Q6ICC9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTL6Q6ICC9 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.3■□□□□ 0.52
RTL6Q6ICC9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTL6Q6ICC9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTL6Q6ICC9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTL6Q6ICC9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RTL6Q6ICC9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL6Q6ICC9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.29■□□□□ 0.52
RTL6Q6ICC9 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL6Q6ICC9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.29■□□□□ 0.52
RTL6Q6ICC9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL6Q6ICC9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.29■□□□□ 0.52
RTL6Q6ICC9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL6Q6ICC9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RTL6Q6ICC9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTL6Q6ICC9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTL6Q6ICC9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.29■□□□□ 0.52
RTL6Q6ICC9 AP006294.2-201ENST00000641667 209 ntBASIC18.29■□□□□ 0.52
RTL6Q6ICC9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RTL6Q6ICC9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTL6Q6ICC9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL6Q6ICC9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.29■□□□□ 0.52
RTL6Q6ICC9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL6Q6ICC9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTL6Q6ICC9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTL6Q6ICC9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTL6Q6ICC9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RTL6Q6ICC9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTL6Q6ICC9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.28■□□□□ 0.52
RTL6Q6ICC9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTL6Q6ICC9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
RTL6Q6ICC9 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.28■□□□□ 0.52
RTL6Q6ICC9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTL6Q6ICC9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms