Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 DUX4L16-201ENST00000555130 1264 ntBASIC21.19■□□□□ 0.98
ATP13A4Q4VNC1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP13A4Q4VNC1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.19■□□□□ 0.98
ATP13A4Q4VNC1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP13A4Q4VNC1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP13A4Q4VNC1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP13A4Q4VNC1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
ATP13A4Q4VNC1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP13A4Q4VNC1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP13A4Q4VNC1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ATP13A4Q4VNC1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A4Q4VNC1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP13A4Q4VNC1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.18■□□□□ 0.98
ATP13A4Q4VNC1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A4Q4VNC1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP13A4Q4VNC1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A4Q4VNC1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A4Q4VNC1 AC016769.1-201ENST00000409132 1010 ntBASIC21.18■□□□□ 0.98
ATP13A4Q4VNC1 AC006015.1-201ENST00000429970 570 ntBASIC21.18■□□□□ 0.98
ATP13A4Q4VNC1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
ATP13A4Q4VNC1 CNN2P6-201ENST00000439038 900 ntBASIC21.18■□□□□ 0.98
ATP13A4Q4VNC1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.18■□□□□ 0.98
ATP13A4Q4VNC1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP13A4Q4VNC1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP13A4Q4VNC1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.18■□□□□ 0.98
ATP13A4Q4VNC1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
ATP13A4Q4VNC1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A4Q4VNC1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A4Q4VNC1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP13A4Q4VNC1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP13A4Q4VNC1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A4Q4VNC1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ATP13A4Q4VNC1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
ATP13A4Q4VNC1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ATP13A4Q4VNC1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP13A4Q4VNC1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP13A4Q4VNC1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.17■□□□□ 0.98
ATP13A4Q4VNC1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP13A4Q4VNC1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP13A4Q4VNC1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP13A4Q4VNC1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP13A4Q4VNC1 KRT18P11-201ENST00000435214 1283 ntBASIC21.17■□□□□ 0.98
ATP13A4Q4VNC1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.17■□□□□ 0.98
ATP13A4Q4VNC1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
ATP13A4Q4VNC1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP13A4Q4VNC1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP13A4Q4VNC1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.17■□□□□ 0.98
ATP13A4Q4VNC1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP13A4Q4VNC1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP13A4Q4VNC1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ATP13A4Q4VNC1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
ATP13A4Q4VNC1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP13A4Q4VNC1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP13A4Q4VNC1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP13A4Q4VNC1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP13A4Q4VNC1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A4Q4VNC1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP13A4Q4VNC1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A4Q4VNC1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A4Q4VNC1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP13A4Q4VNC1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.16■□□□□ 0.98
ATP13A4Q4VNC1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A4Q4VNC1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A4Q4VNC1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A4Q4VNC1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A4Q4VNC1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.16■□□□□ 0.98
ATP13A4Q4VNC1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.16■□□□□ 0.98
ATP13A4Q4VNC1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ATP13A4Q4VNC1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A4Q4VNC1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A4Q4VNC1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.16■□□□□ 0.98
ATP13A4Q4VNC1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A4Q4VNC1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
ATP13A4Q4VNC1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP13A4Q4VNC1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
ATP13A4Q4VNC1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.15■□□□□ 0.98
ATP13A4Q4VNC1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP13A4Q4VNC1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
ATP13A4Q4VNC1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP13A4Q4VNC1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.15■□□□□ 0.98
ATP13A4Q4VNC1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ATP13A4Q4VNC1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP13A4Q4VNC1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.15■□□□□ 0.98
ATP13A4Q4VNC1 FAM21FP-204ENST00000608637 956 ntBASIC21.15■□□□□ 0.98
ATP13A4Q4VNC1 AC013268.1-206ENST00000638368 961 ntBASIC21.15■□□□□ 0.98
ATP13A4Q4VNC1 AC112229.1-201ENST00000639295 961 ntBASIC21.15■□□□□ 0.98
ATP13A4Q4VNC1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ATP13A4Q4VNC1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP13A4Q4VNC1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP13A4Q4VNC1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP13A4Q4VNC1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
ATP13A4Q4VNC1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATP13A4Q4VNC1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ATP13A4Q4VNC1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
ATP13A4Q4VNC1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
ATP13A4Q4VNC1 AC068338.2-201ENST00000563278 1430 ntBASIC21.14■□□□□ 0.98
ATP13A4Q4VNC1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP13A4Q4VNC1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP13A4Q4VNC1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP13A4Q4VNC1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms